RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 SH3BP1Q9Y3L3 701 aa14.17□□□□□ -0.14
NEK3-210ENST00000620675 ARNTLO00327 626 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 TCF3P15923 654 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 IL1R2P27930 398 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 SLC6A4P31645 630 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 RDXP35241 583 aaKnown RBP14.16□□□□□ -0.14
NEK3-210ENST00000620675 SGSHP51688 502 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 MESDQ14696 234 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 FAM133BQ5BKY9 247 aaKnown RBP14.16□□□□□ -0.14
NEK3-210ENST00000620675 ARTNQ5T4W7 220 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 PIK3R6Q5UE93 754 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 SCYL2Q6P3W7 929 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 RFWD3Q6PCD5 774 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 RNF135Q8IUD6 432 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 FNIP1Q8TF40 1166 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 BHMTQ93088 406 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 RNF34Q969K3 372 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 PLD4Q96BZ4 506 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 FAM83CQ9BQN1 747 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 TKTL2Q9H0I9 626 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 KIF9Q9HAQ2 790 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 GPATCH2LQ9NWQ4 482 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 GTSE1Q9NYZ3 720 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 PCSK1NQ9UHG2 260 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
NEK3-210ENST00000620675 E2F8A0AVK6 867 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 MACROD2A1Z1Q3 448 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 MYO1FO00160 1098 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 BUB1BO60566 1050 aaPredicted RBP14.16□□□□□ -0.14
NEK3-210ENST00000620675 MTA2O94776 668 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 MIPP30301 263 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 NOP2P46087 812 aaKnown RBP14.16□□□□□ -0.14
NEK3-210ENST00000620675 KRT83P78385 493 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 RING1Q06587 406 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 NNTQ13423 1086 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 EML3Q32P44 896 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 TJAP1Q5JTD0 557 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 NAIF1Q69YI7 327 aaPredicted RBP14.16□□□□□ -0.14
NEK3-210ENST00000620675 STRADAQ7RTN6 431 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 WDCPQ9H6R7 721 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 DUS2Q9NX74 493 aaKnown RBP14.16□□□□□ -0.14
NEK3-210ENST00000620675 OBP2AQ9NY56 170 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 RRN3Q9NYV6 651 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 PPP2R2CQ9Y2T4 447 aa14.16□□□□□ -0.14
NEK3-210ENST00000620675 ZDBF2Q9HCK1 2354 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 PAGE1O75459 146 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 GBP1P32455 592 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 IRAK1P51617 712 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 TAS2R40P59535 323 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 C14orf80Q86SX3 495 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 RHOT2Q8IXI1 618 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 GJD3Q8N144 294 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 PYROXD2Q8N2H3 581 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 OSCP1Q8WVF1 389 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 CHFRQ96EP1 664 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 TRMT61BQ9BVS5 477 aaKnown RBP14.15□□□□□ -0.14
NEK3-210ENST00000620675 LZTFL1Q9NQ48 299 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 IGSF9Q9P2J2 1179 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 MUTYHQ9UIF7 546 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 WDFY4Q6ZS81 3184 aa14.15□□□□□ -0.14
NEK3-210ENST00000620675 USP27XA6NNY8 438 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 TSPAN3O60637 253 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 MOCS3O95396 460 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 CCR1P32246 355 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 SOX9P48436 509 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 HARS2P49590 506 aaKnown RBP14.14□□□□□ -0.15
NEK3-210ENST00000620675 TCEAL1Q15170 157 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 CA9Q16790 459 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 SMTNL2Q2TAL5 461 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 ATP13A4Q4VNC1 1196 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 TPGS1Q6ZTW0 290 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 TMEM25Q86YD3 366 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 ADGRG2Q8IZP9 1017 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 TPCN2Q8NHX9 752 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 IRX2Q9BZI1 471 aaPredicted RBP14.14□□□□□ -0.15
NEK3-210ENST00000620675 SIK2Q9H0K1 926 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEK3-210ENST00000620675 ARHGEF38Q9NXL2 777 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 PLK2Q9NYY3 685 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 HS3ST4Q9Y661 456 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 KIAA1549LQ6ZVL6 1849 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 FAM72CH0Y354 149 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 ACSL4O60488 711 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 PROSCO94903 275 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 CYP17A1P05093 508 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 CCDC175P0C221 793 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 PPP2R5DQ14738 602 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 MS4A13Q5J8X5 152 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 KCNT1Q5JUK3 1230 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 LY6G5CQ5SRR4 150 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 FAM72AQ5TYM5 149 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 RAP1GAP2Q684P5 730 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 NUGGCQ68CJ6 796 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 FAM72DQ6L9T8 149 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 RHBDF2Q6PJF5 856 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 FAM72BQ86X60 149 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEK3-210ENST00000620675 C17orf53Q8N3J3 647 aaPredicted RBP14.14□□□□□ -0.15
NEK3-210ENST00000620675 NIPA2Q8N8Q9 360 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 DEPDC1BQ8WUY9 529 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms