RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 NLRC5Q86WI3 1866 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 MIB1Q86YT6 1006 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 MAP7D3Q8IWC1 876 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 UNC45BQ8IWX7 931 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 RASGEF1CQ8N431 466 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 CCDC185Q8N715 623 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 ARL14EPQ8N8R7 260 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 MAB21L3Q8N8X9 362 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 KCTD6Q8NC69 237 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 FAM71BQ8TC56 605 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 COG1Q8WTW3 980 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 RAPGEF5Q92565 580 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 HSPH1Q92598 858 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 AZIN2Q96A70 460 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 KCTD12Q96CX2 325 aaKnown RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 TCEAL4Q96EI5 215 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 FCRL2Q96LA5 508 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 GCNAQ96QF7 691 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 HAPLN3Q96S86 360 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 PSMB7Q99436 277 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 SNRNP25Q9BV90 132 aaKnown RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 KLF16Q9BXK1 252 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 NACA2Q9H009 215 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 TKTL2Q9H0I9 626 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 OSBPL2Q9H1P3 480 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 ADAM7Q9H2U9 754 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 TASP1Q9H6P5 420 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 ANLNQ9NQW6 1124 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 GKN1Q9NS71 199 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 CLEC1BQ9P126 229 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 RNF14Q9UBS8 474 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 SLC12A6Q9UHW9 1150 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 ZMYM5Q9UJ78 669 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 RASAL2Q9UJF2 1139 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 CDC23Q9UJX2 597 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 TTC7AQ9ULT0 858 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 FZD10Q9ULW2 581 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 MRPS23Q9Y3D9 190 aaKnown RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 CHD7Q9P2D1 2997 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 LAMA3Q16787 3333 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 CLUHO75153 1309 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 PLXNA4Q9HCM2 1894 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 TRAV19A0A0A6YYK7 116 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 C3orf70A6NLC5 250 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 I6L893 689 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 NRG2O14511 850 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 ZNF185O15231 689 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 CEP104O60308 925 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 IGLV3-27P01718 113 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 HMBSP08397 361 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 MBL2P11226 248 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 IL4RP24394 825 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 L1CAMP32004 1257 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 GJC1P36383 396 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 ZNF135P52742 658 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 CYP4F8P98187 520 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 ITIH3Q06033 890 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 ZNF211Q13398 564 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 TEAD2Q15562 447 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 DPYSL2Q16555 572 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 TAZQ16635 292 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 CA9Q16790 459 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 SLC5A9Q2M3M2 681 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 SMTNL2Q2TAL5 461 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 ODF2Q5BJF6 829 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 EFHC2Q5JST6 749 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 ATAT1Q5SQI0 421 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 GPR158Q5T848 1215 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 ACBD5Q5T8D3 534 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 DCAF12L1Q5VU92 463 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 NUGGCQ68CJ6 796 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 MFSD7Q6UXD7 560 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 SPOCD1Q6ZMY3 1216 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 VSIG1Q86XK7 387 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 CREG2Q8IUH2 290 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 ATP6V0D2Q8N8Y2 350 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 PABPC5Q96DU9 382 aaKnown RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 RBM41Q96IZ5 413 aaKnown RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 C1orf74Q96LT6 269 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 FAM161BQ96MY7 647 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 SLC22A12Q96S37 553 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 MAGEB5Q9BZ81 275 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 S1PR5Q9H228 398 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 DHX35Q9H5Z1 703 aaKnown RBP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 PCDH18Q9HCL0 1135 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 TRPC7Q9HCX4 862 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.32□□□□□ -1.08
CPNE3-209ENST00000620393 GPATCH2LQ9NWQ4 482 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 MTMR10Q9NXD2 777 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 EFR3BQ9Y2G0 817 aa8.32□□□□□ -1.08
CPNE3-209ENST00000620393 LRRD1A4D1F6 860 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 ZNF487B1APH4 448 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 BHMG1C9JSJ3 638 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PI4K2BG5E9Z4 385 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PAGE1O75459 146 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 STC2O76061 302 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 APOEP02649 317 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 KRT1P04264 644 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 CD48P09326 243 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms