RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CGB2Q6NT52 195 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 STRADAQ7RTN6 431 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 TRPM8Q7Z2W7 1104 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 SPATA21Q7Z572 469 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 TFB1MQ8WVM0 346 aaKnown RBP12.82□□□□□ -0.36
CIITA-212ENST00000618207 RNF34Q969K3 372 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 DNAI2Q9GZS0 605 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 CXorf56Q9H5V9 222 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 HAUS2Q9NVX0 235 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 EEF2KO00418 725 aaKnown RBP12.82□□□□□ -0.36
CIITA-212ENST00000618207 NDC80O14777 642 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 GPR182O15218 404 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 SEPT4O43236 478 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 CA12O43570 354 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 USP12O75317 370 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 MT-ND3P03897 115 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 F7P08709 466 aaPredicted RBP12.82□□□□□ -0.36
CIITA-212ENST00000618207 OR4Q2P0C623 313 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 ACTN3Q08043 901 aaPredicted RBP12.82□□□□□ -0.36
CIITA-212ENST00000618207 SREBF2Q12772 1141 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 ANKRD20A2Q5SQ80 823 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 ANKRD20A1Q5TYW2 823 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 ANKRD20A3Q5VUR7 823 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 ADGRD1Q6QNK2 874 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 CES3Q6UWW8 571 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 YTHDF3Q7Z739 585 aaKnown RBP12.82□□□□□ -0.36
CIITA-212ENST00000618207 TDRPQ86YL5 185 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 COLGALT1Q8NBJ5 622 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 SCAMP5Q8TAC9 235 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 HTR3CQ8WXA8 447 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 MYLPFQ96A32 169 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 SERAC1Q96JX3 654 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 RMDN2Q96LZ7 410 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 NPY6RQ99463 290 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 SIK2Q9H0K1 926 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 PRDM12Q9H4Q4 367 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 TMLHEQ9NVH6 421 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 AOC2O75106 756 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 UBOX5O94941 541 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 PYGBP11216 843 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 NUMBP49757 651 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 INHBEP58166 350 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 OVGP1Q12889 678 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 LIMS2Q7Z4I7 341 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 LRRC8CQ8TDW0 803 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 SLC13A1Q9BZW2 595 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 RNF186Q9NXI6 227 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 ACTL7BQ9Y614 415 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 CFAP69A5D8W1 941 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 DAB1O75553 588 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 SUN1O94901 812 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 DAOAP59103 153 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 NR1H3Q13133 447 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 UPP1Q16831 310 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 TTC17Q96AE7 1141 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 P2RY11Q96G91 374 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 SMYD2Q9NRG4 433 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 PHTF1Q9UMS5 762 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 LAMA3Q16787 3333 aa12.81□□□□□ -0.36
CIITA-212ENST00000618207 TRIM49D1C9J1S8 452 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 RNF103O00237 685 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 TYROBPO43914 113 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 LTFP02788 710 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 SRGAP2BP0DMP2 458 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 ERCC2P18074 760 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 PSMB4P28070 264 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 LHX1P48742 406 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 PID1Q7Z2X4 250 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 LRRTM3Q86VH5 581 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 DENND1AQ8TEH3 1009 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 CELF6Q96J87 481 aaKnown RBP12.8□□□□□ -0.36
CIITA-212ENST00000618207 FAM111AQ96PZ2 611 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 USP3Q9Y6I4 520 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 WDR27A2RRH5 827 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 LPXNO60711 386 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 TOP3BO95985 862 aaKnown RBP12.8□□□□□ -0.36
CIITA-212ENST00000618207 RPL34P49207 117 aaKnown RBP12.8□□□□□ -0.36
CIITA-212ENST00000618207 IRX4P78413 519 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 LPIN1Q14693 890 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 SDHAF4Q5VUM1 108 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 UNC5AQ6ZN44 842 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 GGA2Q9UJY4 613 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.8□□□□□ -0.36
CIITA-212ENST00000618207 CCDC78A2IDD5 438 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 H3BRJ5 948 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 FSBPO95073 299 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 ZFXP17010 805 aaPredicted RBP12.8□□□□□ -0.36
CIITA-212ENST00000618207 ADRA1BP35368 520 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 TPI1P60174 286 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 MGAT5Q09328 741 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 IRF5Q13568 498 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 RFX8Q6ZV50 586 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 ZNF534Q76KX8 674 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 LRRC6Q86X45 466 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 OR10T2Q8NGX3 314 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 QKIQ96PU8 341 aaKnown RBP eCLIP12.8□□□□□ -0.36
CIITA-212ENST00000618207 APOL2Q9BQE5 337 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms