RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 SAT1P21673 171 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 CCNFP41002 786 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 CPT1AP50416 773 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 FCGRTP55899 365 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 DEUP1Q05D60 604 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 CCDC15Q0P6D6 951 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 LVRNQ6Q4G3 990 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 PIGZQ86VD9 579 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 ARMCX1Q9P291 453 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 HEY2Q9UBP5 337 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 ITGA11Q9UKX5 1188 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 STARD13Q9Y3M8 1113 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 IPPQ9Y573 584 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 GABBR2O75899 941 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 B3GAT3O94766 335 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 GMPRP36959 345 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 SCNN1GP51170 649 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 ZNF143P52747 638 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 ARL4CP56559 192 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 DPYSL3Q14195 570 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 IQSEC1Q6DN90 963 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 HFE2Q6ZVN8 426 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 FAM161BQ96MY7 647 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 WDR81Q562E7 1941 aa14.95□□□□□ -0.02
SHROOM1-208ENST00000617339 TCRBV5S1A1TA0A578 114 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 OPHN1O60890 802 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 USP1O94782 785 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 PSMG1O95456 288 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 TKTP29401 623 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 SULT1E1P49888 294 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 OASLQ15646 514 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 FYB2Q5VWT5 728 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 DENND5BQ6ZUT9 1274 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 MAP7D3Q8IWC1 876 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 ADGRF2Q8IZF7 708 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 SLC25A41Q8N5S1 370 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 ZFAND2BQ8WV99 257 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 C10orf82Q8WW14 230 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 TBCBQ99426 244 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 MAGEA13PA6NCF6 341 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 C2CD4BA6NLJ0 364 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 KBTBD13C9JR72 458 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 M0QYT0 321 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 XPOTO43592 962 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 UGT1A9O60656 530 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 HAUS5O94927 633 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 SRGAP2BP0DMP2 458 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 SLC34A1Q06495 639 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 ZCCHC9Q8N567 271 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 SHCBP1Q8NEM2 672 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 GTF3C2Q8WUA4 911 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 KHSRPQ92945 711 aaKnown RBP eCLIP14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 UGT1A7Q9HAW7 530 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 UGT1A10Q9HAW8 530 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 UGT1A8Q9HAW9 530 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 TMEM165Q9HC07 324 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 XPNPEP3Q9NQH7 507 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 EDF1O60869 148 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 SREBF2Q12772 1141 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 GRB14Q14449 540 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 CNPY1Q3B7I2 92 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 SYPL2Q5VXT5 272 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 SIX6OS1Q8N1H7 587 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 PCDH19Q8TAB3 1148 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 KATNBL1Q9H079 304 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 TRIP11Q15643 1979 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 ATP8B3O60423 1300 aa14.94□□□□□ -0.02
SHROOM1-208ENST00000617339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 GPR32O75388 356 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 ASMTLO95671 621 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 TOP3BO95985 862 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 SPATA31D3P0C874 917 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 KITP10721 976 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 CYP2F1P24903 491 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 GRM5P41594 1212 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 SLC6A3Q01959 620 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 KBTBD12Q3ZCT8 623 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 PLEKHG4Q58EX7 1191 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 RNASEH2BQ5TBB1 312 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 IZUMO2Q6UXV1 221 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 SPATA31D4Q6ZUB0 917 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 CLNKQ7Z7G1 428 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 BBOF1Q8ND07 529 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 SLC7A14Q8TBB6 771 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 USP33Q8TEY7 942 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 TUBGCP5Q96RT8 1024 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 NACA2Q9H009 215 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 LHX5Q9H2C1 402 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 ADAMTS10Q9H324 1103 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 TRIP12Q14669 1992 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 APOL1O14791 398 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 LMNAP02545 664 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 USP17L7P0C7H9 530 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 GPX6P59796 221 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 DYNC1I2Q13409 638 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 LCLAT1Q6UWP7 414 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 RINLQ6ZS11 566 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 PLD5Q8N7P1 536 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 CFAP61Q8NHU2 1237 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 PREBQ9HCU5 417 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms