RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 SMTNL1A8MU46 457 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 HSF2BPO75031 334 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 ERBB2P04626 1255 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 USP39Q53GS9 565 aaKnown RBP23.05■■□□□ 1.28
CBWD3-212ENST00000616550 DCAF6Q58WW2 860 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 TAF3Q5VWG9 929 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 TAC4Q86UU9 113 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 RASSF3Q86WH2 238 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 KIAA2013Q8IYS2 634 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 CHPFQ8IZ52 775 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 GPR161Q8N6U8 529 aaKnown RBP23.05■■□□□ 1.28
CBWD3-212ENST00000616550 UCMAQ8WVF2 138 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 FCRL2Q96LA5 508 aaPredicted RBP23.05■■□□□ 1.28
CBWD3-212ENST00000616550 BPIFA3Q9BQP9 254 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 IRX2Q9BZI1 471 aaPredicted RBP23.05■■□□□ 1.28
CBWD3-212ENST00000616550 NLRC4Q9NPP4 1024 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 BCCIPQ9P287 314 aaKnown RBP eCLIP23.05■■□□□ 1.28
CBWD3-212ENST00000616550 HCN2Q9UL51 889 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 SIK3Q9Y2K2 1263 aa23.05■■□□□ 1.28
CBWD3-212ENST00000616550 DMDP11532 3685 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 GPR179Q6PRD1 2367 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 IRAK2O43187 625 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 TRUB2O95900 331 aaKnown RBP23.04■■□□□ 1.28
CBWD3-212ENST00000616550 RETP07949 1114 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 HOXB2P14652 356 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 HNRNPLP14866 589 aaKnown RBP eCLIP23.04■■□□□ 1.28
CBWD3-212ENST00000616550 HOXD9P28356 352 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-212ENST00000616550 CDH5P33151 784 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-212ENST00000616550 CDK17Q00537 523 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 SYCP1Q15431 976 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 TAF5Q15542 800 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 PTPN20Q4JDL3 420 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 RFWD3Q6PCD5 774 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 FAM183BPQ6ZVS7 135 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 ANKS1BQ7Z6G8 1248 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 ZDHHC17Q8IUH5 632 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 FAM160A2Q8N612 972 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-212ENST00000616550 MDGA1Q8NFP4 955 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 NEK11Q8NG66 645 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 SLC39A13Q96H72 371 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 PIWIL1Q96J94 861 aaKnown RBP23.04■■□□□ 1.28
CBWD3-212ENST00000616550 SPAG5Q96R06 1193 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 TPSD1Q9BZJ3 242 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 HSD3B7Q9H2F3 369 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 CLEC4EQ9ULY5 219 aa23.04■■□□□ 1.28
CBWD3-212ENST00000616550 RALGAPA1Q6GYQ0 2036 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 GOLGA6L7A0A1B0GV03 622 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 GFRA2O00451 464 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 ZBTB24O43167 697 aaPredicted RBP23.03■■□□□ 1.28
CBWD3-212ENST00000616550 GFPT2O94808 682 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 APOEP02649 317 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 GBP1P32455 592 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 WASP42768 502 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 SLC6A3Q01959 620 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 E2F5Q15329 346 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 GEN1Q17RS7 908 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 PIK3R6Q5UE93 754 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 OLFML1Q6UWY5 402 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 NOP9Q86U38 636 aaKnown RBP23.03■■□□□ 1.28
CBWD3-212ENST00000616550 KBTBD6Q86V97 674 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 ERICH1Q86X53 443 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 DEFB106AQ8N104 65 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 PGBD3Q8N328 593 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 HMGB4Q8WW32 186 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 DDX1Q92499 740 aaKnown RBP23.03■■□□□ 1.28
CBWD3-212ENST00000616550 SLC2A13Q96QE2 648 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 ACOX2Q99424 681 aa23.03■■□□□ 1.28
CBWD3-212ENST00000616550 TCRBV21S2A2A0A5A6 115 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 EPHB6O15197 1021 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 TIMM44O43615 452 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 TBL1XO60907 577 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 GRAP2O75791 330 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 LSM8O95777 96 aaKnown RBP23.02■■□□□ 1.28
CBWD3-212ENST00000616550 SLC6A4P31645 630 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 SOX5P35711 763 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 STAT1P42224 750 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 KLHL40Q2TBA0 621 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 FAM133BQ5BKY9 247 aaKnown RBP23.02■■□□□ 1.28
CBWD3-212ENST00000616550 ZC3H12AQ5D1E8 599 aaKnown RBP23.02■■□□□ 1.28
CBWD3-212ENST00000616550 MPP7Q5T2T1 576 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 ZNF677Q86XU0 584 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 MSANTD4Q8NCY6 345 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 EPS8L1Q8TE68 723 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 C18orf8Q96DM3 657 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 ERGIC2Q96RQ1 377 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 FAM204AQ9H8W3 233 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 SLC12A6Q9UHW9 1150 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 SDK1Q7Z5N4 2213 aa23.02■■□□□ 1.28
CBWD3-212ENST00000616550 TYW5A2RUC4 315 aaKnown RBP23.01■■□□□ 1.27
CBWD3-212ENST00000616550 NPC1O15118 1278 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 MOCS2O96007 188 aaPredicted RBP23.01■■□□□ 1.27
CBWD3-212ENST00000616550 IGLV3-25P01717 112 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 MMEP08473 750 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 SLC2A3P11169 496 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 ATP1A3P13637 1013 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 PTMSP20962 102 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 ZNF165P49910 485 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 JAM2P57087 298 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 ARID5AQ03989 594 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 NADSYN1Q6IA69 706 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms