RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CDK4P11802 303 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 EPHA3P29320 983 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 OLIG2Q13516 323 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 LAYNQ6UX15 382 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 ATG14Q6ZNE5 492 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 SPNS2Q8IVW8 549 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 CPNE9Q8IYJ1 553 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 BHLHE22Q8NFJ8 381 aaPredicted RBP13.56□□□□□ -0.24
MSH6-214ENST00000616033 PPWD1Q96BP3 646 aaKnown RBP13.56□□□□□ -0.24
MSH6-214ENST00000616033 ABHD8Q96I13 439 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 ZNF512Q96ME7 567 aaPredicted RBP13.56□□□□□ -0.24
MSH6-214ENST00000616033 ZDHHC15Q96MV8 337 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 ZNF277Q9NRM2 450 aaPredicted RBP13.56□□□□□ -0.24
MSH6-214ENST00000616033 ADA2Q9NZK5 511 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 BTBD7Q9P203 1132 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 CYTH4Q9UIA0 394 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 APOEP02649 317 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 XRCC1P18887 633 aaPredicted RBP13.56□□□□□ -0.24
MSH6-214ENST00000616033 IDH3AP50213 366 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 PRKCEQ02156 737 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 SFSWAPQ12872 951 aaKnown RBP13.56□□□□□ -0.24
MSH6-214ENST00000616033 MAP3K21Q5TCX8 1036 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 TMEM198Q66K66 360 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 NCCRP1Q6ZVX7 275 aaPredicted RBP13.56□□□□□ -0.24
MSH6-214ENST00000616033 IFNLR1Q8IU57 520 aaPredicted RBP13.56□□□□□ -0.24
MSH6-214ENST00000616033 PQLC1Q8N2U9 271 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 EME1Q96AY2 570 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 AGAP3Q96P47 875 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 GPAMQ9HCL2 828 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 PCDHA10Q9Y5I2 948 aa13.56□□□□□ -0.24
MSH6-214ENST00000616033 SMIM31A0A1B0GVY4 71 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 DNAJA2O60884 412 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 PHKA2P46019 1235 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 TEX44Q53QW1 395 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 DRICH1Q6PGQ1 229 aaPredicted RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 C4orf19Q8IY42 314 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 LARGE2Q8N3Y3 721 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 SSX2IPQ9Y2D8 614 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 NDC80O14777 642 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 ZBTB14O43829 449 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 KLHL2O95198 593 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 SMIM18P0DKX4 95 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 COX4I1P13073 169 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 GLRBP48167 497 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 CDKL1Q00532 357 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 ZNF699Q32M78 642 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 SLC9B1Q4ZJI4 515 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 RARS2Q5T160 578 aaKnown RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 CYP2R1Q6VVX0 501 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 CCDC60Q8IWA6 550 aaPredicted RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 FBXW8Q8N3Y1 598 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 SYTL5Q8TDW5 730 aaPredicted RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 DIS3LQ8TF46 1054 aaKnown RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 CMTM5Q96DZ9 223 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 PIWIL1Q96J94 861 aaKnown RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 CATSPER2Q96P56 530 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 KLC2Q9H0B6 622 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 Q9H521 79 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 C17orf75Q9HAS0 396 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 ARHGAP26Q9UNA1 814 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 PSAT1Q9Y617 370 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 APOC4-APOC2K7ER74 178 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 M0QYV0 167 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 ADCY6O43306 1168 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 PRPSAP2O60256 369 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 USP12O75317 370 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 MT-CO1P00395 513 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 APOC2P02655 101 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 ERVK-10P10266 1014 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 PDGFRAP16234 1089 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 SLC25A11Q02978 314 aaKnown RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 HSP90AA5PQ58FG0 334 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 TEDDM1Q5T9Z0 273 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 ANGEL2Q5VTE6 544 aaKnown RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
MSH6-214ENST00000616033 KRT80Q6KB66 452 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 KLC3Q6P597 504 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 POTEAQ6S8J7 498 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 B3GNT9Q6UX72 402 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 SH2D5Q6ZV89 423 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 SLC7A5P1Q8MH63 180 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 MYO1HQ8N1T3 1032 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 ZNF781Q8N8C0 355 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 VCPIP1Q96JH7 1222 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 CORO1BQ9BR76 489 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 CAB39LQ9H9S4 337 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 TMEM216Q9P0N5 145 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 SIRPGQ9P1W8 387 aa13.55□□□□□ -0.24
MSH6-214ENST00000616033 TRMUO75648 421 aaKnown RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 ZBTB7AO95365 584 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 THOP1P52888 689 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 BAATQ14032 418 aaPredicted RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 EEPD1Q7L9B9 569 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 MAVSQ7Z434 540 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 SIX5Q8N196 739 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 ATP2A3Q93084 1043 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms