RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 TIMM13Q9Y5L4 95 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 SETD1AO15047 1707 aaKnown RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 FAM47DPA6NHR8 397 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 AOC2O75106 756 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 PMPCBO75439 489 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 HABP4Q5JVS0 413 aaKnown RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 C9orf57Q5W0N0 161 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 SMYD5Q6GMV2 418 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 OR9Q1Q8NGQ5 310 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 CEP70Q8NHQ1 597 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 FOXN3O00409 490 aaPredicted RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 TBL1XO60907 577 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 GLRA3O75311 464 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 ATXN8OSP0DMR3 200 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 PAGE2BQ5JRK9 111 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 TTI2Q6NXR4 508 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 MCOLN2Q8IZK6 566 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 PCYOX1LQ8NBM8 494 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 ATL1Q8WXF7 558 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZNF669Q96BR6 464 aaPredicted RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 SEMA6BQ9H3T3 888 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 WHRNQ9P202 907 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 GTF2IRD1Q9UHL9 959 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 HBS1LQ9Y450 684 aaKnown RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 C4BP0C0L5 1744 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 NHSL1Q5SYE7 1610 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 LRRC72A6NJI9 287 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 CES2O00748 559 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 FTH1P02794 183 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 OCM2P0CE71 109 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 OCMP0CE72 109 aaPredicted RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 INPP5AQ14642 412 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 FAM47EQ6ZV65 393 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 SERBP1Q8NC51 408 aaKnown RBP eCLIP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZDHHC6Q9H6R6 413 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 FAM32AQ9Y421 112 aaKnown RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 CDY1Q9Y6F8 540 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 E2F6O75461 281 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 CHGBP05060 677 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 MTHFRP42898 656 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 SCNN1BP51168 640 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 LLGL1Q15334 1064 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 BMT2Q1RMZ1 405 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 HLA-DQA1Q5Y7H0 255 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 SLC13A5Q86YT5 568 aaPredicted RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 KIAA0319LQ8IZA0 1049 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 BEND7Q8N7W2 519 aaPredicted RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 TMEM161BQ8NDZ6 487 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 TBC1D30Q9Y2I9 924 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 M0R3G1 203 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 RAD51BO15315 384 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 IFNA14P01570 189 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 ACAT1P24752 427 aaKnown RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 CARSP49589 748 aaKnown RBP10□□□□□ -0.81
TNFRSF9-204ENST00000615230 GJA9P57773 515 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 MAP3K10Q02779 954 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 AVL9Q8NBF6 648 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 DUSP16Q9BY84 665 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 RAD21L1Q9H4I0 556 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 GNPTGQ9UJJ9 305 aa10□□□□□ -0.81
TNFRSF9-204ENST00000615230 B4GALT4O60513 344 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CDH16O75309 829 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CLK3P49761 638 aaKnown RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 GRIK5Q16478 980 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 AASDHQ4L235 1098 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 LPCAT2Q7L5N7 544 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 DEFB106AQ8N104 65 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 FAM71DQ8N9W8 422 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZNF606Q8WXB4 792 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 BTBD6Q96KE9 485 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 TGS1Q96RS0 853 aaKnown RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 ULBP1Q9BZM6 244 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 RBM22Q9NW64 420 aaKnown RBP eCLIP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 RPS6KB2Q9UBS0 482 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 PLCH1Q4KWH8 1693 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 IGKV6D-41A0A0C4DH26 115 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CCDC130P13994 396 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 GABRR2P28476 465 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 ARFIP2P53365 341 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 SLC20A2Q08357 652 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CCDC157Q569K6 752 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 FUT10Q6P4F1 479 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 ETNPPLQ8TBG4 499 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 HHIPL1Q96JK4 782 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 ASB2Q96Q27 587 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 OSGEPL1Q9H4B0 414 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 AASDHPPTQ9NRN7 309 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CTNNAL1Q9UBT7 734 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 EML1O00423 815 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 KPNA3O00505 521 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 HSPA1AP0DMV8 641 aaKnown RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 HSPA1BP0DMV9 641 aaKnown RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 MLNP12872 115 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 WEE1P30291 646 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CCNG2Q16589 344 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 C16orf89Q6UX73 402 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 GLT6D1Q7Z4J2 308 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 C17orf53Q8N3J3 647 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 PDCD7Q8N8D1 485 aaKnown RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CATSPER1Q8NEC5 780 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms