RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 HTR3DQ70Z44 454 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 MTSS1LQ765P7 747 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 PSTKQ8IV42 348 aaKnown RBP15.26■□□□□ 0.03
CD48-203ENST00000613788 RHOT1Q8IXI2 618 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 TDRD5Q8NAT2 981 aaKnown RBP15.26■□□□□ 0.03
CD48-203ENST00000613788 TTC16Q8NEE8 873 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 HAPLN3Q96S86 360 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 IRX2Q9BZI1 471 aaPredicted RBP15.26■□□□□ 0.03
CD48-203ENST00000613788 GOLPH3Q9H4A6 298 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 CCL26Q9Y258 94 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.26■□□□□ 0.03
CD48-203ENST00000613788 HYOU1Q9Y4L1 999 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 LATS1O95835 1130 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 MOCS2O96007 188 aaPredicted RBP15.25■□□□□ 0.03
CD48-203ENST00000613788 VIPR2P41587 438 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 SLC25A11Q02978 314 aaKnown RBP15.25■□□□□ 0.03
CD48-203ENST00000613788 TFF2Q03403 129 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 ZNF569Q5MCW4 686 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 POLNQ7Z5Q5 900 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 NT5DC3Q86UY8 548 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 DENND1CQ8IV53 801 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 C17orf53Q8N3J3 647 aaPredicted RBP15.25■□□□□ 0.03
CD48-203ENST00000613788 ADAMTS19Q8TE59 1207 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 DDX50Q9BQ39 737 aaKnown RBP15.25■□□□□ 0.03
CD48-203ENST00000613788 THG1LQ9NWX6 298 aaKnown RBP15.25■□□□□ 0.03
CD48-203ENST00000613788 TBC1D14Q9P2M4 693 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 THEGQ9P2T0 379 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 FZD10Q9ULW2 581 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 EYSQ5T1H1 3165 aa15.25■□□□□ 0.03
CD48-203ENST00000613788 XIRP2A4UGR9 3374 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 CCDC66A2RUB6 948 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 MIF4GDA9UHW6 222 aaKnown RBP15.24■□□□□ 0.03
CD48-203ENST00000613788 SLC9A3R1O14745 358 aaPredicted RBP15.24■□□□□ 0.03
CD48-203ENST00000613788 PSTPIP1O43586 416 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 ACSL4O60488 711 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 PAGE1O75459 146 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 KLKB1P03952 638 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 TAS2R40P59535 323 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 SCAPQ12770 1279 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 USP4Q13107 963 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 ZNF77Q15935 545 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 EFHC2Q5JST6 749 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 TANGO2Q6ICL3 276 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 CPNE8Q86YQ8 564 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 CCDC185Q8N715 623 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 BPIFB1Q8TDL5 484 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 TEKT4Q8WW24 435 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 ELSPBP1Q96BH3 223 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 RPGRIP1Q96KN7 1286 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 C1orf74Q96LT6 269 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 ZWILCHQ9H900 591 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 PRDM6Q9NQX0 595 aa15.24■□□□□ 0.03
CD48-203ENST00000613788 AGO1Q9UL18 857 aaKnown RBP15.24■□□□□ 0.03
CD48-203ENST00000613788 HEPACAM2A8MVW5 462 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 GREM1O60565 184 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 ECI2O75521 394 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 FTCDO95954 541 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 RARAP10276 462 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 TNNT1P13805 278 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 TCF4P15884 667 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 FCARP24071 287 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 IL1R2P27930 398 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 CHKAP35790 457 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 MLLT6P55198 1093 aaPredicted RBP15.23■□□□□ 0.03
CD48-203ENST00000613788 GNG11P61952 73 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 ODF2Q5BJF6 829 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 ZFYVE27Q5T4F4 411 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 Q6ZNB5 142 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 MFSD6LQ8IWD5 586 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 ZDHHC14Q8IZN3 488 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 UBL4BQ8N7F7 174 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 CD101Q93033 1021 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 WBP2Q969T9 261 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 NXPE3Q969Y0 559 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 OTUB2Q96DC9 234 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 PEBP4Q96S96 227 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 SNRNP25Q9BV90 132 aaKnown RBP15.23■□□□□ 0.03
CD48-203ENST00000613788 SIK2Q9H0K1 926 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 OSBPL2Q9H1P3 480 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 DDX56Q9NY93 547 aaKnown RBP15.23■□□□□ 0.03
CD48-203ENST00000613788 AP4E1Q9UPM8 1137 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 JRKLQ9Y4A0 524 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 PCDHA3Q9Y5H8 950 aa15.23■□□□□ 0.03
CD48-203ENST00000613788 C2CD4DB7Z1M9 353 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 SP100P23497 879 aaPredicted RBP15.22■□□□□ 0.03
CD48-203ENST00000613788 CTNNA2P26232 953 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 CTNNA1P35221 906 aaKnown RBP15.22■□□□□ 0.03
CD48-203ENST00000613788 GJC1P36383 396 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 KCNT1Q5JUK3 1230 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 ADGRF1Q5T601 910 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 MEI1Q5TIA1 1274 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 PARM1Q6UWI2 310 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 CYP4V2Q6ZWL3 525 aaPredicted RBP15.22■□□□□ 0.03
CD48-203ENST00000613788 MAP7D3Q8IWC1 876 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 YAF2Q8IY57 180 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 SLC35F6Q8N357 371 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 DEPDC1BQ8WUY9 529 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 HSPH1Q92598 858 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 DHX35Q9H5Z1 703 aaKnown RBP15.22■□□□□ 0.03
CD48-203ENST00000613788 ANLNQ9NQW6 1124 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms