RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CAPN12Q6ZSI9 719 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 SH2D5Q6ZV89 423 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 ZNF554Q86TJ5 538 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 Q9H521 79 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 IFT122Q9HBG6 1241 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 ARHGAP28Q9P2N2 729 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 SCINQ9Y6U3 715 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 GCNT1Q02742 428 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 ENPEPQ07075 957 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 FAAP100Q0VG06 881 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 LRRC38Q5VT99 294 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 TRIM72Q6ZMU5 477 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 C3orf62Q6ZUJ4 267 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 MON1BQ7L1V2 547 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 UBE2Q1Q7Z7E8 422 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 PRPF39Q86UA1 669 aaKnown RBP22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 RNF168Q8IYW5 571 aaPredicted RBP22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 SEMA4DQ92854 862 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 MRPS26Q9BYN8 205 aaKnown RBP22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 FRMD8P1Q9BZ68 369 aaPredicted RBP22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 ADAMTS10Q9H324 1103 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 PCIF1Q9H4Z3 704 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 CHMP2BQ9UQN3 213 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 CDY2AQ9Y6F7 541 aa22.64■■□□□ 1.21
POLR2J3-220ENST00000613744 ZC3H11AO75152 810 aaKnown RBP eCLIP22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 CHRNA1P02708 482 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 ZSCAN5DPP0CG00 497 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 NSFP46459 744 aaKnown RBP22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 TBL3Q12788 808 aaKnown RBP22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 DCTN2Q13561 401 aaKnown RBP22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 SNX17Q15036 470 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 TRIM71Q2Q1W2 868 aaKnown RBP22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 HP1BP3Q5SSJ5 553 aaPredicted RBP22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 ZNF618Q5T7W0 954 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 TAS1R3Q7RTX0 852 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 ANKRD33Q7Z3H0 272 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 RSPH3Q86UC2 560 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 FBXO27Q8NI29 283 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 GDPD5Q8WTR4 605 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 TMEM40Q8WWA1 233 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 TTC17Q96AE7 1141 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 SLITRK1Q96PX8 696 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 FAM111AQ96PZ2 611 aa22.63■■□□□ 1.21
POLR2J3-220ENST00000613744 K7ERI5 159 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 CPOXP36551 454 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 SERPINB8P50452 374 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 ADARP55265 1226 aaKnown RBP22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 MRPS6P82932 125 aaKnown RBP22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 EFTUD2Q15029 972 aaKnown RBP eCLIP22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 ANKMY2Q8IV38 441 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 CLPTM1LQ96KA5 538 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 CBWD1Q9BRT8 395 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 RBM38Q9H0Z9 239 aaKnown RBP22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 USP29Q9HBJ7 922 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 C15orf38-AP3S2A0A0A6YYH1 394 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 H0YCG3 227 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 INO80B-WBP1J3KQ70 363 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 TLR3O15455 904 aaKnown RBP22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 SPAG6O75602 509 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 IQCF3P0C7M6 154 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 CKBP12277 381 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 SSTR1P30872 391 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 AQP4P55087 323 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 BTKQ06187 659 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 C1QTNF12Q5T7M4 302 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 ARPINQ7Z6K5 226 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 MAP4K3Q8IVH8 894 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 ICA1LQ8NDH6 482 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 FBXL13Q8NEE6 735 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 TMC2Q8TDI7 906 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 DDI1Q8WTU0 396 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 INO80BQ9C086 356 aaPredicted RBP22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 STN1Q9H668 368 aaKnown RBP22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 ALG13Q9NP73 1137 aaKnown RBP22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 RHBDL2Q9NX52 303 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 PCDHB2Q9Y5E7 798 aa22.62■■□□□ 1.21
POLR2J3-220ENST00000613744 TTLL13PA6NNM8 815 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 HNRNPDLO14979 420 aaKnown RBP22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 CLPTM1O96005 669 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 CD58P19256 250 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 KDSRQ06136 332 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 RBM44Q6ZP01 1051 aaKnown RBP22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 SEZ6LQ9BYH1 1024 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 MKS1Q9NXB0 559 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 EXOC7Q9UPT5 735 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 GOLGA8RI6L899 631 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 M0QZ92 97 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 WASHC5Q12768 1159 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 DLG1Q12959 904 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 C1orf53Q5VUE5 145 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 PLEKHA7Q6IQ23 1121 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 USP37Q86T82 979 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 ZBTB8OSQ8IWT0 167 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 PALM2Q8IXS6 379 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 SLC44A1Q8WWI5 657 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 IP6K2Q9UHH9 426 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 IKBKGQ9Y6K9 419 aa22.61■■□□□ 1.21
POLR2J3-220ENST00000613744 C2orf71A6NGG8 1288 aa22.6■■□□□ 1.21
POLR2J3-220ENST00000613744 OR6B1O95007 311 aa22.6■■□□□ 1.21
POLR2J3-220ENST00000613744 EDN1P05305 212 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms