RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ANKRD20A2Q5SQ80 823 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 ANKRD20A1Q5TYW2 823 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 ANKRD20A3Q5VUR7 823 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 LVRNQ6Q4G3 990 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 CCNYQ8ND76 341 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 MYLPFQ96A32 169 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
NEK3-205ENST00000610828 GGT7Q9UJ14 662 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 ZWINTO95229 277 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 LTFP02788 710 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 TPSB2P20231 275 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 ADRA1BP35368 520 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 GRIA1P42261 906 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 SCTRP47872 440 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 NKX3-2P78367 333 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 CAP1Q01518 475 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 MTFR1Q15390 333 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 TPSAB1Q15661 275 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 TTC31Q49AM3 519 aaPredicted RBP14.07□□□□□ -0.16
NEK3-205ENST00000610828 LACTB2Q53H82 288 aaPredicted RBP14.07□□□□□ -0.16
NEK3-205ENST00000610828 CGB2Q6NT52 195 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 RFX8Q6ZV50 586 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 ZNF534Q76KX8 674 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 METTL23Q86XA0 190 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 PPM1NQ8N819 430 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 RTP3Q9BQQ7 232 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 CEP41Q9BYV8 373 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 SSU72Q9NP77 194 aaKnown RBP14.07□□□□□ -0.16
NEK3-205ENST00000610828 ABCF3Q9NUQ8 709 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 DDIT4Q9NX09 232 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 SEPT10Q9P0V9 454 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 TTLL3Q9Y4R7 772 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.07□□□□□ -0.16
NEK3-205ENST00000610828 TSC2P49815 1807 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 A0A0A0MRY4 1105 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 FAM72CH0Y354 149 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 MT-ND3P03897 115 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 BDNFP23560 247 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 FAAP100Q0VG06 881 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 SEMA5AQ13591 1074 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 FAM72AQ5TYM5 149 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 FBXW10Q5XX13 1052 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 FAM72DQ6L9T8 149 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 PACS2Q86VP3 889 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 FAM72BQ86X60 149 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 KLHDC9Q8NEP7 349 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 LRRC8CQ8TDW0 803 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 EDEM1Q92611 657 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 LRRC39Q96DD0 335 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 P2RY11Q96G91 374 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 SPATA13Q96N96 652 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 FERMT1Q9BQL6 677 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 WDR6Q9NNW5 1121 aaKnown RBP14.06□□□□□ -0.16
NEK3-205ENST00000610828 PNPLA8Q9NP80 782 aa14.06□□□□□ -0.16
NEK3-205ENST00000610828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.06□□□□□ -0.16
NEK3-205ENST00000610828 MYO18AQ92614 2054 aaKnown RBP14.06□□□□□ -0.16
NEK3-205ENST00000610828 HHLA1C9JL84 531 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 STK10O94804 968 aaKnown RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 YY1P25490 414 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 MAGEA3P43357 314 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 CBLBQ13191 982 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 PDK1Q15118 436 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 PDK4Q16654 411 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 CCSAPQ6IQ19 270 aaPredicted RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 LRRC6Q86X45 466 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 MPP5Q8N3R9 675 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 COLGALT1Q8NBJ5 622 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 TCP10LQ8TDR4 215 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 SLC9A7Q96T83 725 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 TRIM56Q9BRZ2 755 aaKnown RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 C12orf65Q9H3J6 166 aaKnown RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 PRDM16Q9HAZ2 1276 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 ANLNQ9NQW6 1124 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 ARL2BPQ9Y2Y0 163 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 C9IYK1 514 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 RNF103O00237 685 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 PPP1R12AO14974 1030 aaPredicted RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 FAM155BO75949 473 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 APOEP02649 317 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 ADRA1DP25100 572 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 SARNPP82979 210 aaKnown RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 GRIK3Q13003 919 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 ITGA7Q13683 1181 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 DPYSQ14117 519 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 DSC3Q14574 896 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 PRKD1Q15139 912 aaPredicted RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 UNC5AQ6ZN44 842 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 SLC26A11Q86WA9 606 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 TP53INP2Q8IXH6 220 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 BANPQ8N9N5 519 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 CCDC63Q8NA47 563 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 ALKBH8Q96BT7 664 aaKnown RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 PGBD4Q96DM1 585 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 SIGLEC10Q96LC7 697 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 ACBD6Q9BR61 282 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 PLAC1Q9HBJ0 212 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 XAB2Q9HCS7 855 aaKnown RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 SLCO1B3Q9NPD5 702 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms