RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, human

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UCHL3-205	ENST00000607339	KIT	P10721	976 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	GRK6	P43250	576 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	PTDSS1	P48651	473 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	PGGT1B	P53609	377 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	SLC29A2	Q14542	456 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	POLD3	Q15054	466 aa	Predicted RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	PUM3	Q15397	648 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	CNN3	Q15417	329 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	MAEA	Q7L5Y9	396 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	EDC3	Q96F86	508 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	TBATA	Q96M53	351 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	RIPOR3	Q96MK2	946 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	PAGR1	Q9BTK6	254 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	CRB3	Q9BUF7	120 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	LRRC27	Q9C0I9	530 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	WDR12	Q9GZL7	423 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	NUAK2	Q9H093	628 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	ZMAT3	Q9HA38	289 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	AFF4	Q9UHB7	1163 aa	Known RBP	4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	HDAC9	Q9UKV0	1011 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	FZD4	Q9ULV1	537 aa		4.99	□□□□□ -1.61
UCHL3-205	ENST00000607339	JAK3	P52333	1124 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	SEC23B	Q15437	767 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	SLC4A8	Q2Y0W8	1093 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	AWAT1	Q58HT5	328 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	ZNF549	Q6P9A3	640 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	C18orf65	Q6ZTR6	163 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	FAM57B	Q71RH2	274 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	UEVLD	Q8IX04	471 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	IL31RA	Q8NI17	732 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	PHKB	Q93100	1093 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	NMD3	Q96D46	503 aa	Known RBP	4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	ISCA1	Q9BUE6	129 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	APOL5	Q9BWW9	433 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	RNF26	Q9BY78	433 aa	Predicted RBP	4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	BTBD1	Q9H0C5	482 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	AGO4	Q9HCK5	861 aa	Known RBP	4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	STARD7	Q9NQZ5	370 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	FNIP2	Q9P278	1114 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	LPAR3	Q9UBY5	353 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	TPCN1	Q9ULQ1	816 aa		4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.98	□□□□□ -1.61
UCHL3-205	ENST00000607339	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	ATF7	P17544	494 aa	Predicted RBP	4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	TPH1	P17752	444 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	ACVR2A	P27037	513 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	RBL1	P28749	1068 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	CHKA	P35790	457 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	PRIM2	P49643	509 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	CPT1A	P50416	773 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	EIF4A1	P60842	406 aa	Known RBP	4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	IRX6	P78412	446 aa	Predicted RBP	4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	CCDC15	Q0P6D6	951 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	SLC14A1	Q13336	389 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	IZUMO3	Q5VZ72	239 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	PGBD2	Q6P3X8	592 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	KRBA2	Q6ZNG9	492 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	TRAPPC11	Q7Z392	1133 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	PPHLN1	Q8NEY8	458 aa	Known RBP	4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	LTV1	Q96GA3	475 aa	Predicted RBP	4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	ZDHHC12	Q96GR4	267 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	WDYHV1	Q96HA8	205 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	MPP4	Q96JB8	637 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	MEIS3	Q99687	375 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	MYLK2	Q9H1R3	596 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	CERS4	Q9HA82	394 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	USP29	Q9HBJ7	922 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	TMEM8A	Q9HCN3	771 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	TMEM45A	Q9NWC5	275 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	DNAJB11	Q9UBS4	358 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	SNX13	Q9Y5W8	968 aa		4.97	□□□□□ -1.61
UCHL3-205	ENST00000607339	PLAU	P00749	431 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	PARP1	P09874	1014 aa	Known RBP	4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	BRAF	P15056	766 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	TNFSF4	P23510	183 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	PPM1A	P35813	382 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	PIK3CB	P42338	1070 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	TEC	P42680	631 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	DGKQ	P52824	942 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	YPEL5	P62699	121 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	ICA1	Q05084	483 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	TBX2	Q13207	712 aa	Predicted RBP	4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	JAKMIP3	Q5VZ66	844 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	TLDC1	Q6P9B6	456 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	CCDC174	Q6PII3	467 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	LDHAL6A	Q6ZMR3	332 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	B4GALNT4	Q76KP1	1039 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	ANKRD18A	Q8IVF6	992 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	SLC44A5	Q8NCS7	719 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	OR56A3	Q8NH54	315 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	APIP	Q96GX9	242 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	CTAGE1	Q96RT6	745 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	MRPL44	Q9H9J2	332 aa	Known RBP	4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	RIMKLB	Q9ULI2	386 aa		4.96	□□□□□ -1.62
UCHL3-205	ENST00000607339	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms