RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 IRX2Q9BZI1 471 aaPredicted RBP25.19■■□□□ 1.62
UBE2E3-213ENST00000602959 SLC27A6Q9Y2P4 619 aa25.19■■□□□ 1.62
UBE2E3-213ENST00000602959 PTPRZ1P23471 2315 aaPredicted RBP25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 TEX33O43247 280 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 CAVIN2O95810 425 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 TRUB2O95900 331 aaKnown RBP25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 TIE1P35590 1138 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 SLC11A2P49281 568 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 NOMO3P69849 1222 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 CDR2Q01850 454 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 SLC6A3Q01959 620 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 EIF4EBP2Q13542 120 aaPredicted RBP25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 ZSCAN23Q3MJ62 389 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 MPPE1Q53F39 396 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 DCAF6Q58WW2 860 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 FAM133BQ5BKY9 247 aaKnown RBP25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 EMC10Q5UCC4 262 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 HEATR6Q6AI08 1181 aaKnown RBP25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 HHIPQ96QV1 700 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 SLC2A11Q9BYW1 496 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 CBX8Q9HC52 389 aa25.18■■□□□ 1.62
UBE2E3-213ENST00000602959 A0A1B0GTH6 734 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 ACSL4O60488 711 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 DAB1O75553 588 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 HOXD9P28356 352 aaPredicted RBP25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 CNR2P34972 360 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 SCNN1AP37088 669 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 FILIP1LQ4L180 1135 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 DEFB106AQ8N104 65 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 CCDC33Q8N5R6 958 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 ZNF513Q8N8E2 541 aaPredicted RBP25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 DDI1Q8WTU0 396 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 C18orf8Q96DM3 657 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 HCN2Q9UL51 889 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 FRYLO94915 3013 aa25.17■■□□□ 1.62
UBE2E3-213ENST00000602959 PRRT4C9JH25 899 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 GRAP2O75791 330 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 KLF8O95600 359 aaPredicted RBP25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 APBB3O95704 486 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 CHRNB2P17787 502 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 PITX1P78337 314 aaPredicted RBP25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 CDK17Q00537 523 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 FMO1Q01740 532 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 CRY1Q16526 586 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 RNF43Q68DV7 783 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 NADSYN1Q6IA69 706 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 TRMT11Q7Z4G4 463 aaKnown RBP25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 ERICH1Q86X53 443 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 TXNDC5Q8NBS9 432 aaKnown RBP25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 MSANTD4Q8NCY6 345 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 EBF1Q9UH73 591 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 SPAG17Q6Q759 2223 aa25.16■■□□□ 1.62
UBE2E3-213ENST00000602959 A0A1W2PQC6 194 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 SGK1O00141 431 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 ADAM23O75077 832 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 CYP1A1P04798 512 aaPredicted RBP25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 PXNP49023 591 aaPredicted RBP25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 EOGTQ5NDL2 527 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 NAA35Q5VZE5 725 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 TRIM72Q6ZMU5 477 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 LUZP1Q86V48 1076 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 XYLT1Q86Y38 959 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 TSTD1Q8NFU3 115 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 TMA16Q96EY4 203 aaKnown RBP25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 DDX50Q9BQ39 737 aaKnown RBP25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 FAM204AQ9H8W3 233 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 CLEC4EQ9ULY5 219 aa25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 SMG5Q9UPR3 1016 aaKnown RBP25.15■■□□□ 1.62
UBE2E3-213ENST00000602959 HRO43593 1189 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 TSPAN3O60637 253 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 APOEP02649 317 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 SLC6A4P31645 630 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 DGKEP52429 567 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 TPM4P67936 248 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 MPP7Q5T2T1 576 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 PIK3R6Q5UE93 754 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 EGFLAMQ63HQ2 1017 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 RFWD3Q6PCD5 774 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 TMEM92Q6UXU6 159 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 CACNA2D4Q7Z3S7 1137 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 ANKS1BQ7Z6G8 1248 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 CPA5Q8WXQ8 436 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 NAP1L5Q96NT1 182 aaPredicted RBP25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 ZDHHC4Q9NPG8 344 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 MYO6Q9UM54 1294 aa25.14■■□□□ 1.62
UBE2E3-213ENST00000602959 GOLGA6L7A0A1B0GV03 622 aa25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 HNRNPLP14866 589 aaKnown RBP eCLIP25.13■■□□□ 1.615e-6■■■■□ 19.8
UBE2E3-213ENST00000602959 GBP1P32455 592 aa25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 NOS2P35228 1153 aa25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 MATKP42679 507 aa25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 SGSHP51688 502 aa25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 ZC3H12AQ5D1E8 599 aaKnown RBP25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 BTN2A3PQ96KV6 586 aa25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 DDIT4Q9NX09 232 aa25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 RRN3Q9NYV6 651 aa25.13■■□□□ 1.61
UBE2E3-213ENST00000602959 AXIN1O15169 862 aa25.12■■□□□ 1.61
UBE2E3-213ENST00000602959 MOCS2O96007 188 aaPredicted RBP25.12■■□□□ 1.61
UBE2E3-213ENST00000602959 SLC2A3P11169 496 aa25.12■■□□□ 1.61
UBE2E3-213ENST00000602959 GEN1Q17RS7 908 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms