RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 TUBB4AP04350 444 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 SLC8A1P32418 973 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 VPS41P49754 854 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 AP2B1P63010 937 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 SF3A3Q12874 501 aaKnown RBP eCLIP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 ZNF268Q14587 947 aaPredicted RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 KPNB1Q14974 876 aaKnown RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 PFKFB3Q16875 520 aaPredicted RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 AAK1Q2M2I8 961 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 ANKRD40Q6AI12 368 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 SULT6B1Q6IMI4 303 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 KYAT3Q6YP21 454 aaKnown RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 ZNF813Q6ZN06 617 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 RAB11FIP2Q7L804 512 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 SLC44A2Q8IWA5 706 aaPredicted RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 OR4N4Q8N0Y3 316 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 MYCT1Q8N699 235 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 STT3BQ8TCJ2 826 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 ZNF398Q8TD17 642 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 REXO5Q96IC2 774 aaKnown RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 ELOVL1Q9BW60 279 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 NUAK2Q9H093 628 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 CCDC134Q9H6E4 229 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 PRDM8Q9NQV8 689 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 ADARB2Q9NS39 739 aaKnown RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 ARL8BQ9NVJ2 186 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 CNTN6Q9UQ52 1028 aa5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 HEMK1Q9Y5R4 338 aaPredicted RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 SIRT4Q9Y6E7 314 aaPredicted RBP5.47□□□□□ -1.53
UBE2E3-212ENST00000602888 FAM90A18PA6NE21 464 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 FAM90A16PA6NEW6 464 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 FAM90A9PA6NNJ1 464 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 M0QYT0 321 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 PPP6CO00743 305 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 PRYO14603 147 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 NKX2-8O15522 239 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 LARGE1O95461 756 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 FAM90A15PP0C7V4 464 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 FAM90A14PP0C7W9 464 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 EPHB2P29323 1055 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 AGTR2P50052 363 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 PNLIPRP1P54315 467 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 C21orf58P58505 322 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 CEP78Q5JTW2 689 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 ZNF569Q5MCW4 686 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 KIAA1614Q5VZ46 1190 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 TANGO2Q6ICL3 276 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 NFRKBQ6P4R8 1299 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 CCDC117Q8IWD4 279 aaPredicted RBP5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 OSR1Q8TAX0 266 aaPredicted RBP5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 DDB2Q92466 427 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 SENP7Q9BQF6 1050 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 PABPC3Q9H361 631 aaKnown RBP5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 AGO4Q9HCK5 861 aaKnown RBP5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 ASNSD1Q9NWL6 643 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 DAPP1Q9UN19 280 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 ZBTB1Q9Y2K1 713 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 FRMD4BQ9Y2L6 1034 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 WDR17Q8IZU2 1322 aa5.46□□□□□ -1.54
UBE2E3-212ENST00000602888 EFCAB8A8MWE9 144 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 NBNO60934 754 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 TACR3P29371 465 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 MPGP29372 298 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 HOXD12P35452 270 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 GRK6P43250 576 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 TLE3Q04726 772 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 SRSF4Q08170 494 aaKnown RBP5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 GAB1Q13480 694 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 SEC23BQ15437 767 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 ANO1Q5XXA6 986 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 MIS18BP1Q6P0N0 1132 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 WDR93Q6P2C0 686 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 LAS2Q8IYD9 372 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 GALNT16Q8N428 558 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 OTUD7AQ8TE49 926 aaPredicted RBP5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 TRAPPC12Q8WVT3 735 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 HMGB4Q8WW32 186 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 ASB12Q8WXK4 309 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 CCT6BQ92526 530 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 PAGR1Q9BTK6 254 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 MECRQ9BV79 373 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 SORBS1Q9BX66 1292 aaKnown RBP5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 TMEM120AQ9BXJ8 343 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 BRD8Q9H0E9 1235 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 MLXIPQ9HAP2 919 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 PDGFCQ9NRA1 345 aa5.45□□□□□ -1.54
UBE2E3-212ENST00000602888 HMX3A6NHT5 357 aa5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 SLC38A8A6NNN8 435 aa5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 C16orf96A6NNT2 1141 aa5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 VEGFAP15692 232 aaPredicted RBP5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 STAT6P42226 847 aa5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 CDK7P50613 346 aa5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 TAS2R50P59544 299 aa5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 RPL15P61313 204 aaKnown RBP5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 MRPS21P82921 87 aaKnown RBP5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 GLE1Q53GS7 698 aaKnown RBP5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 SRFBP1Q8NEF9 429 aaKnown RBP5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 SCAMP5Q8TAC9 235 aa5.44□□□□□ -1.54
UBE2E3-212ENST00000602888 MAP4K1Q92918 833 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms