RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CD93Q9NPY3 652 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 HESX1Q9UBX0 185 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 PLA2G4CQ9UP65 541 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 COQ4Q9Y3A0 265 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 FASNP49327 2511 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 SLC12A8A0AV02 714 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 METTL12A8MUP2 240 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 XPO1O14980 1071 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 GJB3O75712 270 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 ZNF202O95125 648 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 TKTL1P51854 596 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 BCAT1P54687 386 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 TRIP6Q15654 476 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 GEN1Q17RS7 908 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 COBLL1Q53SF7 1204 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 SCML4Q8N228 414 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 WFIKKN2Q8TEU8 576 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 RNF139Q8WU17 664 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 CAMK1GQ96NX5 476 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 SLC6A17Q9H1V8 727 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 STOML2Q9UJZ1 356 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 LHX6Q9UPM6 363 aa18.64■□□□□ 0.57
SHKBP1-227ENST00000602011 PCDH15Q96QU1 1955 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 MEI4A8MW99 385 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 TAF4O00268 1085 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 SLC16A3O15427 465 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 NCAM1P13591 858 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 IL12RB1P42701 662 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 TPMTP51580 245 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 FKBP3Q00688 224 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 ZBTB16Q05516 673 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 SGO2Q562F6 1265 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 KCTD13Q8WZ19 329 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 SEMA4DQ92854 862 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 TSG101Q99816 390 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 MKRN2Q9H000 416 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 ABCC13Q9NSE7 274 aa18.63■□□□□ 0.57
SHKBP1-227ENST00000602011 HMBSP08397 361 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 PRR29P0C7W0 189 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 SETSIPP0DME0 302 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 VDRP11473 427 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 TBXAS1P24557 533 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 BST2Q10589 180 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 ZNF234Q14588 700 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 MPP7Q5T2T1 576 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 ADGRF1Q5T601 910 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 LRSAM1Q6UWE0 723 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 SERPINA13PQ6UXR4 307 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 RAB44Q7Z6P3 723 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 GLRX5Q86SX6 157 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 OR2T3Q8NH03 318 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 TMA16Q96EY4 203 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 GSDMAQ96QA5 445 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 GPR174Q9BXC1 333 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 CIPCQ9C0C6 399 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 CNGB3Q9NQW8 809 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 KIAA1522Q9P206 1035 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 APOBEC2Q9Y235 224 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 PCDHGB2Q9Y5G2 931 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 NBEAQ8NFP9 2946 aa18.62■□□□□ 0.57
SHKBP1-227ENST00000602011 FREM2Q5SZK8 3169 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 BCAT2O15382 392 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 CER1O95813 267 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 ATP5BP06576 529 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 EPHX1P07099 455 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 SFSWAPQ12872 951 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 CUL2Q13617 745 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 SUZ12Q15022 739 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 UNC45BQ8IWX7 931 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 RBBP8NLQ8NC74 664 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 ADAMTS14Q8WXS8 1223 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 ULBP1Q9BZM6 244 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 OSGEPQ9NPF4 335 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 TSPAN16Q9UKR8 245 aa18.61■□□□□ 0.57
SHKBP1-227ENST00000602011 IRAK2O43187 625 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 SH3BP5O60239 455 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 GRIK2Q13002 908 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 CAMK2GQ13555 558 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 STILQ15468 1287 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 DCAF12L1Q5VU92 463 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 BSPRYQ5W0U4 402 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 FMNL3Q8IVF7 1028 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 NAXDQ8IW45 347 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 SIX6OS1Q8N1H7 587 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 SPRYD3Q8NCJ5 442 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 IRGQQ8WZA9 623 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 GOLGA1Q92805 767 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 TATDN2Q93075 761 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 AZIN2Q96A70 460 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 METTL14Q9HCE5 456 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 SUN2Q9UH99 717 aa18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 HOOK1Q9UJC3 728 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-227ENST00000602011 PMM2O15305 246 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 SMC2O95347 1197 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 PAEPP09466 180 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 MAOBP27338 520 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 PPP1R2P41236 205 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 MATKP42679 507 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 COPAP53621 1224 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms