RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 KCNT1Q5JUK3 1230 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 DDX42Q86XP3 938 aaKnown RBP eCLIP21.23■□□□□ 0.99
PNKP-215ENST00000600910 UNC45BQ8IWX7 931 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 CD101Q93033 1021 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 PRDM6Q9NQX0 595 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 ZFP37Q9Y6Q3 630 aaPredicted RBP21.23■□□□□ 0.99
PNKP-215ENST00000600910 KLKB1P03952 638 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 CORO1AP31146 461 aaKnown RBP21.22■□□□□ 0.99
PNKP-215ENST00000600910 ADRA1BP35368 520 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 TFF2Q03403 129 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 OTOP3Q7RTS5 596 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 RHOT1Q8IXI2 618 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 RIN3Q8TB24 985 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 NTAN1Q96AB6 310 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 SNRNP25Q9BV90 132 aaKnown RBP21.22■□□□□ 0.99
PNKP-215ENST00000600910 XPO7Q9UIA9 1087 aaKnown RBP21.22■□□□□ 0.99
PNKP-215ENST00000600910 FZD10Q9ULW2 581 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 SH3BP1Q9Y3L3 701 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 UNC80Q8N2C7 3258 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 SCAMP3O14828 347 aaKnown RBP21.22■□□□□ 0.99
PNKP-215ENST00000600910 VIPR2P41587 438 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 AIF1P55008 147 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 ZNF77Q15935 545 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 ATP13A4Q4VNC1 1196 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 ERMARDQ5T6L9 678 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 POLNQ7Z5Q5 900 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 DENND1CQ8IV53 801 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 CELF5Q8N6W0 485 aaKnown RBP21.22■□□□□ 0.99
PNKP-215ENST00000600910 ATP6V0D2Q8N8Y2 350 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 ST13P5Q8NFI4 369 aaPredicted RBP21.22■□□□□ 0.99
PNKP-215ENST00000600910 ACSF2Q96CM8 615 aaPredicted RBP21.22■□□□□ 0.99
PNKP-215ENST00000600910 BTN2A3PQ96KV6 586 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 KIF9Q9HAQ2 790 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 TRPV4Q9HBA0 871 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 GPATCH2LQ9NWQ4 482 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 SLC12A6Q9UHW9 1150 aa21.22■□□□□ 0.99
PNKP-215ENST00000600910 LSM7Q9UK45 103 aaKnown RBP21.22■□□□□ 0.99
PNKP-215ENST00000600910 PSTPIP1O43586 416 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 GREM1O60565 184 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 PAGE1O75459 146 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 KRT7P08729 469 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 RARAP10276 462 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 TCF3P15923 654 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 FCARP24071 287 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 CTNNA1P35221 906 aaKnown RBP21.21■□□□□ 0.99
PNKP-215ENST00000600910 MARCKSL1P49006 195 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 SCAPQ12770 1279 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 USP4Q13107 963 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 SMAD2Q15796 467 aaKnown RBP21.21■□□□□ 0.99
PNKP-215ENST00000600910 BOLA3Q53S33 107 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 MEI1Q5TIA1 1274 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 LRRC38Q5VT99 294 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 PTCRAQ6ISU1 281 aaPredicted RBP21.21■□□□□ 0.99
PNKP-215ENST00000600910 HSPH1Q92598 858 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 KRT35Q92764 455 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 RSPRY1Q96DX4 576 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 C16orf45Q96MC5 204 aaPredicted RBP21.21■□□□□ 0.99
PNKP-215ENST00000600910 MAGEB5Q9BZ81 275 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 DCLK3Q9C098 648 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 AGO1Q9UL18 857 aaKnown RBP21.21■□□□□ 0.99
PNKP-215ENST00000600910 AP4E1Q9UPM8 1137 aa21.21■□□□□ 0.99
PNKP-215ENST00000600910 EFHC2Q5JST6 749 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 NYAP1Q6ZVC0 841 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 HTR3DQ70Z44 454 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 TEKT4Q8WW24 435 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 HES6Q96HZ4 224 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 WDR24Q96S15 920 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 HAPLN3Q96S86 360 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 PHF7Q9BWX1 381 aaPredicted RBP21.2■□□□□ 0.98
PNKP-215ENST00000600910 ZFP14Q9HCL3 533 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 EPS15L1Q9UBC2 864 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 JRKLQ9Y4A0 524 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 PCDHA3Q9Y5H8 950 aa21.2■□□□□ 0.98
PNKP-215ENST00000600910 E2F8A0AVK6 867 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 CCDC66A2RUB6 948 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 MIF4GDA9UHW6 222 aaKnown RBP21.19■□□□□ 0.98
PNKP-215ENST00000600910 ENC1O14682 589 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 CTNNA2P26232 953 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 SLC11A2P49281 568 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 DNA2P51530 1060 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 MTA1Q13330 715 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 CA9Q16790 459 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 ZFYVE27Q5T4F4 411 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 TANGO2Q6ICL3 276 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 Q6ZNB5 142 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 LRRC3BQ96PB8 259 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 SIK2Q9H0K1 926 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 DHX35Q9H5Z1 703 aaKnown RBP21.19■□□□□ 0.98
PNKP-215ENST00000600910 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.19■□□□□ 0.98
PNKP-215ENST00000600910 KLHL11Q9NVR0 708 aa21.19■□□□□ 0.98
PNKP-215ENST00000600910 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.19■□□□□ 0.98
PNKP-215ENST00000600910 HEPACAM2A8MVW5 462 aa21.18■□□□□ 0.98
PNKP-215ENST00000600910 ACSL4O60488 711 aa21.18■□□□□ 0.98
PNKP-215ENST00000600910 GGCXP38435 758 aa21.18■□□□□ 0.98
PNKP-215ENST00000600910 PUS10Q3MIT2 529 aaKnown RBP21.18■□□□□ 0.98
PNKP-215ENST00000600910 MS4A13Q5J8X5 152 aa21.18■□□□□ 0.98
PNKP-215ENST00000600910 PIK3R6Q5UE93 754 aa21.18■□□□□ 0.98
PNKP-215ENST00000600910 NADSYN1Q6IA69 706 aa21.18■□□□□ 0.98
PNKP-215ENST00000600910 PSTKQ8IV42 348 aaKnown RBP21.18■□□□□ 0.98
PNKP-215ENST00000600910 BBS7Q8IWZ6 715 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms