RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 AZIN2Q96A70 460 aa16.39■□□□□ 0.21
RPS28-203ENST00000600659 PRICKLE1Q96MT3 831 aaPredicted RBP16.39■□□□□ 0.21
RPS28-203ENST00000600659 TRIM62Q9BVG3 475 aa16.39■□□□□ 0.21
RPS28-203ENST00000600659 ZDHHC4Q9NPG8 344 aa16.39■□□□□ 0.21
RPS28-203ENST00000600659 DEC1Q9P2X7 70 aa16.39■□□□□ 0.21
RPS28-203ENST00000600659 ZFHX2Q9C0A1 2572 aaPredicted RBP16.38■□□□□ 0.21
RPS28-203ENST00000600659 PLXND1Q9Y4D7 1925 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 PRRT4C9JH25 899 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 ACSL4O60488 711 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 ADAM23O75077 832 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 MMP8P22894 467 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 HOXA6P31267 233 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 MRPS21P82921 87 aaKnown RBP16.38■□□□□ 0.21
RPS28-203ENST00000600659 DCAF6Q58WW2 860 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 GRAMD4Q6IC98 578 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 ASCL5Q7RTU5 278 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 BNIPLQ7Z465 357 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 ERICH1Q86X53 443 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 ZDHHC17Q8IUH5 632 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 IL17RCQ8NAC3 791 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 NT5C3BQ969T7 300 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 C18orf8Q96DM3 657 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 NUCKS1Q9H1E3 243 aaKnown RBP16.38■□□□□ 0.21
RPS28-203ENST00000600659 ZSCAN32Q9NX65 697 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 TMEM59LQ9UK28 342 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 SLC27A6Q9Y2P4 619 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 STARD13Q9Y3M8 1113 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 PCDHGA2Q9Y5H1 932 aa16.38■□□□□ 0.21
RPS28-203ENST00000600659 DOCK4Q8N1I0 1966 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 LRRC53A6NM62 1247 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 KCNU1A8MYU2 1149 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 I6L893 689 aaPredicted RBP16.37■□□□□ 0.21
RPS28-203ENST00000600659 CAPN9O14815 690 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 TSPAN3O60637 253 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 FLT3P36888 993 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 TNFRSF4P43489 277 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 DGKGP49619 791 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 CENPCQ03188 943 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 ARID5AQ03989 594 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 GEN1Q17RS7 908 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 FILIP1LQ4L180 1135 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 C2orf27AQ580R0 203 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 ZC3H12AQ5D1E8 599 aaKnown RBP16.37■□□□□ 0.21
RPS28-203ENST00000600659 PIK3R6Q5UE93 754 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 RFWD3Q6PCD5 774 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 LRSAM1Q6UWE0 723 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 UNC45BQ8IWX7 931 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 SUMF1Q8NBK3 374 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 WFDC5Q8TCV5 224 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 XPO6Q96QU8 1125 aaKnown RBP16.37■□□□□ 0.21
RPS28-203ENST00000600659 NPY6RQ99463 290 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 FAM126AQ9BYI3 521 aaPredicted RBP16.37■□□□□ 0.21
RPS28-203ENST00000600659 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 MMP17Q9ULZ9 603 aa16.37■□□□□ 0.21
RPS28-203ENST00000600659 GVINP1Q7Z2Y8 2422 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 PRR23AA6NEV1 266 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 SGK1O00141 431 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 ATG13O75143 517 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 SERPINC1P01008 464 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 NOS2P35228 1153 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 TIE1P35590 1138 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 MATKP42679 507 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 FNTBP49356 437 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 MRE11P49959 708 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
RPS28-203ENST00000600659 DMC1Q14565 340 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 CLEC16AQ2KHT3 1053 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 FIGNQ5HY92 759 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 C10orf76Q5T2E6 689 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 ARTNQ5T4W7 220 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 FAM102AQ5T9C2 384 aaPredicted RBP16.36■□□□□ 0.21
RPS28-203ENST00000600659 EGFLAMQ63HQ2 1017 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 TMEM215Q68D42 235 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 TMEM92Q6UXU6 159 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 TRIM72Q6ZMU5 477 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 MMS22LQ6ZRQ5 1243 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 CACNA2D4Q7Z3S7 1137 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 ALLCQ8N6M5 410 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 SLC30A5Q8TAD4 765 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 ACDQ96AP0 544 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 PGAP3Q96FM1 320 aaPredicted RBP16.36■□□□□ 0.21
RPS28-203ENST00000600659 LMLNQ96KR4 655 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 HHIPQ96QV1 700 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 PRMT1Q99873 361 aaKnown RBP16.36■□□□□ 0.21
RPS28-203ENST00000600659 C11orf70Q9BRQ4 267 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 SYNCQ9H7C4 482 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 CD248Q9HCU0 757 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 ANLNQ9NQW6 1124 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 DDIT4Q9NX09 232 aa16.36■□□□□ 0.21
RPS28-203ENST00000600659 EP300Q09472 2414 aaPredicted RBP16.36■□□□□ 0.21
RPS28-203ENST00000600659 TCRBV5S1A1TA0A578 114 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 TBC1D3BA6NDS4 549 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 MOCS2O96007 188 aaPredicted RBP16.35■□□□□ 0.21
RPS28-203ENST00000600659 FERP16591 822 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 HLA-FP30511 346 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 UBASH3AP57075 661 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 ZNF445P59923 1031 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 CDK17Q00537 523 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 MPPE1Q53F39 396 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms