RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 BLOC1S4Q9NUP1 217 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 AFPP02771 609 aaKnown RBP18.53■□□□□ 0.56
SSBP4-207ENST00000600244 ATP5C1P36542 298 aaKnown RBP18.53■□□□□ 0.56
SSBP4-207ENST00000600244 UBAP2LQ14157 1087 aaKnown RBP18.53■□□□□ 0.56
SSBP4-207ENST00000600244 DHX8Q14562 1220 aaKnown RBP18.53■□□□□ 0.56
SSBP4-207ENST00000600244 C6orf132Q5T0Z8 1188 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 PAQR9Q6ZVX9 377 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 ANKS1BQ7Z6G8 1248 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 B3GALNT2Q8NCR0 500 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 OR6B3Q8NGW1 331 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 VCPIP1Q96JH7 1222 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 TMEM245Q9H330 911 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 POLR1BQ9H9Y6 1135 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 GDF3Q9NR23 364 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 CLEC4EQ9ULY5 219 aa18.53■□□□□ 0.56
SSBP4-207ENST00000600244 R3HCC1Q9Y3T6 440 aaKnown RBP18.53■□□□□ 0.56
SSBP4-207ENST00000600244 TLN1Q9Y490 2541 aaKnown RBP18.53■□□□□ 0.56
SSBP4-207ENST00000600244 NBPF19A0A087WUL8 3843 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 GOLGA8IPA6NC78 632 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 GOLGA8JA6NMD2 632 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 C10orf142B7Z368 130 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 WNT9AO14904 365 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 TIMM44O43615 452 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 CD38P28907 300 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 ARRB1P49407 418 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-207ENST00000600244 NFKB2Q00653 900 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 GOLGA8FQ08AF8 430 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 GOLGA8DPQ0D2H9 430 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 GNL2Q13823 731 aaKnown RBP18.52■□□□□ 0.56
SSBP4-207ENST00000600244 MCTP1Q6DN14 999 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 ANKRD36BP1Q96IX9 119 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 ERVMER34-1Q9H9K5 563 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 OSER1Q9NX31 292 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 ZDHHC9Q9Y397 364 aa18.52■□□□□ 0.56
SSBP4-207ENST00000600244 USP9YO00507 2555 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-207ENST00000600244 TBCAO75347 108 aaKnown RBP18.51■□□□□ 0.55
SSBP4-207ENST00000600244 KLKB1P03952 638 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 ITGB6P18564 788 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 GARTP22102 1010 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 SERINC3Q13530 473 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 MCM6Q14566 821 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 LINC00303Q3SY05 128 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 IGF2-ASQ6U949 168 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 XKR5Q6UX68 686 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 BRAPQ7Z569 592 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 CIPCQ9C0C6 399 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 DMAP1Q9NPF5 467 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-207ENST00000600244 TLR8Q9NR97 1041 aaKnown RBP18.51■□□□□ 0.55
SSBP4-207ENST00000600244 THSD1Q9NS62 852 aa18.51■□□□□ 0.55
SSBP4-207ENST00000600244 SLC26A4O43511 780 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 USP12O75317 370 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 STC2O76061 302 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 DNTTP04053 509 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 KRT18P05783 430 aaKnown RBP18.5■□□□□ 0.55
SSBP4-207ENST00000600244 ZSCAN22P10073 491 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-207ENST00000600244 PLA2G4AP47712 749 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 NXPH1P58417 271 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 ARL13BQ3SXY8 428 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 KLHDC10Q6PID8 442 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 DYMQ7RTS9 669 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 FAM35AQ86V20 835 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 ZMIZ2Q8NF64 920 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 IPO9Q96P70 1041 aaKnown RBP18.5■□□□□ 0.55
SSBP4-207ENST00000600244 FBRSQ9HAH7 460 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 PRSS16Q9NQE7 514 aa18.5■□□□□ 0.55
SSBP4-207ENST00000600244 A8MXQ7 604 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 CST3P01034 146 aaPredicted RBP18.49■□□□□ 0.55
SSBP4-207ENST00000600244 CR2P20023 1033 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 GALCP54803 685 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 KCNJ12Q14500 433 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 DUOXA2Q1HG44 320 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 CCDC81Q6ZN84 652 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 ZNF366Q8N895 744 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 CBWD1Q9BRT8 395 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 SLC2A11Q9BYW1 496 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 ZSCAN16Q9H4T2 348 aaPredicted RBP18.49■□□□□ 0.55
SSBP4-207ENST00000600244 BSNQ9UPA5 3926 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 CREBBPQ92793 2442 aa18.49■□□□□ 0.55
SSBP4-207ENST00000600244 VWA3AA6NCI4 1184 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 TLR4O00206 839 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 TRIM38O00635 465 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 MDM4O15151 490 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 OPA1O60313 960 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 F13A1P00488 732 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 TNNC2P02585 160 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 MYF5P13349 255 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 CHKAP35790 457 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 ASIC1P78348 528 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 RILPL1Q5EBL4 403 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 USP30Q70CQ3 517 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 SFR1Q86XK3 245 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 OXR1Q8N573 874 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 DEPDC7Q96QD5 511 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 FBXO44Q9H4M3 255 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 AASDHPPTQ9NRN7 309 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 EXOC7Q9UPT5 735 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 ZNF510Q9Y2H8 683 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 ANKRD17O75179 2603 aaKnown RBP18.48■□□□□ 0.55
SSBP4-207ENST00000600244 ATP8B3O60423 1300 aa18.48■□□□□ 0.55
SSBP4-207ENST00000600244 CLEC18AA5D8T8 446 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms