RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CLEC4EQ9ULY5 219 aa15.82■□□□□ 0.12
LIG1-219ENST00000600055 MYOFQ9NZM1 2061 aa15.82■□□□□ 0.12
LIG1-219ENST00000600055 A0A1W2PQJ5 194 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.81■□□□□ 0.12
LIG1-219ENST00000600055 GFRA2O00451 464 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 LATS1O95835 1130 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 APODP05090 189 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 CISD3P0C7P0 127 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 SP9P0CG40 484 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 FLT3P36888 993 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 SCNN1AP37088 669 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 GRIA2P42262 883 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 MATKP42679 507 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 SLC11A2P49281 568 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 NME3Q13232 169 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 FBXO43Q4G163 708 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 FAM133BQ5BKY9 247 aaKnown RBP15.81■□□□□ 0.12
LIG1-219ENST00000600055 ADGRF1Q5T601 910 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 GRAMD4Q6IC98 578 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 ZNF571Q7Z3V5 609 aaPredicted RBP15.81■□□□□ 0.12
LIG1-219ENST00000600055 DNAAF5Q86Y56 855 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 PHF13Q86YI8 300 aaPredicted RBP15.81■□□□□ 0.12
LIG1-219ENST00000600055 RPLP0P6Q8NHW5 317 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 DDI1Q8WTU0 396 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 ATOH1Q92858 354 aaPredicted RBP15.81■□□□□ 0.12
LIG1-219ENST00000600055 MYEOVQ96EZ4 313 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 NPY6RQ99463 290 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 IER2Q9BTL4 223 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 PRMT8Q9NR22 394 aaPredicted RBP15.81■□□□□ 0.12
LIG1-219ENST00000600055 ADAM22Q9P0K1 906 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 TMEM59LQ9UK28 342 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 CAPN11Q9UMQ6 739 aa15.81■□□□□ 0.12
LIG1-219ENST00000600055 ARIH1Q9Y4X5 557 aaPredicted RBP15.81■□□□□ 0.12
LIG1-219ENST00000600055 A0A0A0MRY4 1105 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 TBC1D3BA6NDS4 549 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 M0QYT0 321 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 AP5Z1O43299 807 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 CBFA2T2O43439 604 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 CYBBP04839 570 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 GYPCP04921 128 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 CHRM1P11229 460 aaPredicted RBP15.8■□□□□ 0.12
LIG1-219ENST00000600055 GBP1P32455 592 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 PRKCIP41743 596 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 CXCL12P48061 93 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 DGKGP49619 791 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 SULT1E1P49888 294 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 NHLH1Q02575 133 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 KLHL30Q0D2K2 578 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 C2orf27AQ580R0 203 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 ACAD10Q6JQN1 1059 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 MAMSTRQ6ZN01 415 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 MON1BQ7L1V2 547 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 EMC1Q8N766 993 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 USP33Q8TEY7 942 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 AZIN2Q96A70 460 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 TMA16Q96EY4 203 aaKnown RBP15.8■□□□□ 0.12
LIG1-219ENST00000600055 TBCBQ99426 244 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 PHOX2BQ99453 314 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 NUCKS1Q9H1E3 243 aaKnown RBP15.8■□□□□ 0.12
LIG1-219ENST00000600055 RBSNQ9H1K0 784 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 ZDHHC4Q9NPG8 344 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 FBXO10Q9UK96 956 aa15.8■□□□□ 0.12
LIG1-219ENST00000600055 ITIH6Q6UXX5 1313 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 TMCO5BA8MYB1 307 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 KCNU1A8MYU2 1149 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 PRRT4C9JH25 899 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 APOEP02649 317 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 TPM3P06753 285 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 TDGF1P13385 188 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 HOXD9P28356 352 aaPredicted RBP15.79■□□□□ 0.12
LIG1-219ENST00000600055 CASP14P31944 242 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 TIE1P35590 1138 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 CCR3P51677 355 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 ATXN1P54253 815 aaKnown RBP15.79■□□□□ 0.12
LIG1-219ENST00000600055 ZBED6P86452 979 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 MPPE1Q53F39 396 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 C10orf76Q5T2E6 689 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 PIK3R6Q5UE93 754 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 RAP1GAP2Q684P5 730 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 GAS2L3Q86XJ1 694 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 CCDC33Q8N5R6 958 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 TERB1Q8NA31 727 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 JOSD2Q8TAC2 188 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 RNF34Q969K3 372 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 NT5C3BQ969T7 300 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 CFAP57Q96MR6 1250 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 PRICKLE1Q96MT3 831 aaPredicted RBP15.79■□□□□ 0.12
LIG1-219ENST00000600055 PIGVQ9NUD9 493 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIG1-219ENST00000600055 FBXO4Q9UKT5 387 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 HCN2Q9UL51 889 aa15.79■□□□□ 0.12
LIG1-219ENST00000600055 CHURC1-FNTBB4DL54 471 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 K7ESF4 209 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 DDX3XO00571 662 aaKnown RBP eCLIP15.78■□□□□ 0.122e-12■■■□□ 16.8
LIG1-219ENST00000600055 TBL1XO60907 577 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 CALB1P05937 261 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 CCR1P32246 355 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 TNFRSF4P43489 277 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 KIR2DL1P43626 348 aaPredicted RBP15.78■□□□□ 0.12
LIG1-219ENST00000600055 DMWDQ09019 674 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms