RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 USP46P62068 366 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 KIF19Q2TAC6 998 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 LAYNQ6UX15 382 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 ETFBKMTQ8IXQ9 262 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 PDCL2Q8N4E4 241 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 VPS16Q9H269 839 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 INTS13Q9NVM9 706 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 DPP3Q9NY33 737 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 SNX11Q9Y5W9 270 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 SLCO1B1Q9Y6L6 691 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 LGALS16A8MUM7 142 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 CBX4O00257 560 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 P4HA2O15460 535 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 BRINP1O60477 761 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 SERPINC1P01008 464 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 DLATP10515 647 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 MBL2P11226 248 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 C6P13671 934 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 FMO5P49326 533 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 UBASH3AP57075 661 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 SLC7A9P82251 487 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 TARDBPQ13148 414 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 ZACNQ401N2 412 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 CBWD6Q4V339 395 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 DCAF17Q5H9S7 520 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 CBWD3Q5JTY5 395 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 CBWD5Q5RIA9 395 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 ARHGAP40Q5TG30 622 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 TCERG1LQ5VWI1 586 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 GRAMD4Q6IC98 578 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 NUDT18Q6ZVK8 323 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 SV2AQ7L0J3 742 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 OR5B17Q8NGF7 314 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 CXorf38Q8TB03 319 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 KCNV2Q8TDN2 545 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 FGF11Q92914 225 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 TMEM176AQ96HP8 235 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 ZFRQ96KR1 1074 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 LGMNQ99538 433 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 CPNE5Q9HCH3 593 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 TMEM8AQ9HCN3 771 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 WSB2Q9NYS7 404 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 IFNKQ9P0W0 207 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 L1RE1Q9UN81 338 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 COQ4Q9Y3A0 265 aa14.63□□□□□ -0.07
SHKBP1-218ENST00000598907 GTPBP10A4D1E9 387 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 TRIM66O15016 1216 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 TEX33O43247 280 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 TNNI1P19237 187 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 GRIK1P39086 918 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 GCLMP48507 274 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 CCT8P50990 548 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 MYL7Q01449 175 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 RHDQ02161 417 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 IFRD2Q12894 506 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 DUOXA2Q1HG44 320 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 HES3Q5TGS1 186 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 KRT39Q6A163 491 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 ZNF560Q96MR9 790 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 PKMYT1Q99640 499 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 GABRG3Q99928 467 aa14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 XPO4Q9C0E2 1151 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 DNAJC17Q9NVM6 304 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-218ENST00000598907 ZNF840PA6NDX5 716 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 WASH3PC4AMC7 463 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 HOXC11O43248 304 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 TPM2P07951 284 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 PBX1P40424 430 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 PSMC1P62191 440 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 DNAJC3Q13217 504 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 INAVAQ3KP66 663 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 CFAP221Q4G0U5 840 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 FILIP1LQ4L180 1135 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 TDRD10Q5VZ19 366 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 DPY19L2P1Q6NXN4 242 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 TRAPPC11Q7Z392 1133 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 FAM124AQ86V42 546 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 OSTM1Q86WC4 334 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 BBS7Q8IWZ6 715 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 CADM4Q8NFZ8 388 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 LMO3Q8TAP4 145 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 CACTINQ8WUQ7 758 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 MYLPFQ96A32 169 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 FAM84AQ96KN4 292 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 ERGIC2Q96RQ1 377 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 ACBD6Q9BR61 282 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 TBC1D14Q9P2M4 693 aa14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 USP9XQ93008 2570 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-218ENST00000598907 A0A1W2PQC6 194 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 METTL12A8MUP2 240 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 H0Y8X5 98 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 CBFA2T2O43439 604 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 HUS1O60921 280 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 ATP2C2O75185 946 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 RFPL3O75679 317 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 VNN1O95497 513 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 OLFM2O95897 454 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 OAS1P00973 400 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 CST3P01034 146 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 TNNC2P02585 160 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms