RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 GFPT1Q06210 699 aaPredicted RBP20.9■□□□□ 0.94
IRF3-221ENST00000598808 DHCR24Q15392 516 aa20.9■□□□□ 0.94
IRF3-221ENST00000598808 CDO1Q16878 200 aa20.9■□□□□ 0.94
IRF3-221ENST00000598808 ZC3H12AQ5D1E8 599 aaKnown RBP20.9■□□□□ 0.94
IRF3-221ENST00000598808 LY6G5CQ5SRR4 150 aa20.9■□□□□ 0.94
IRF3-221ENST00000598808 JOSD2Q8TAC2 188 aa20.9■□□□□ 0.94
IRF3-221ENST00000598808 CCDC42Q96M95 316 aa20.9■□□□□ 0.94
IRF3-221ENST00000598808 CNOT8Q9UFF9 292 aaKnown RBP20.9■□□□□ 0.94
IRF3-221ENST00000598808 COL4A2P08572 1712 aa20.9■□□□□ 0.94
IRF3-221ENST00000598808 SSU72P8A0A1W2PR75 194 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 EIF3CLB5ME19 914 aaKnown RBP20.89■□□□□ 0.94
IRF3-221ENST00000598808 PDGFRAP16234 1089 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 CTHP32929 405 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 AMPD2Q01433 879 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 DEUP1Q05D60 604 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 ZNF852Q6ZMS4 543 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 Q6ZNB5 142 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 KIAA1958Q8N8K9 716 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 RXFP2Q8WXD0 754 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 FAM3CQ92520 227 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 TBCBQ99426 244 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 EIF3CQ99613 913 aaKnown RBP20.89■□□□□ 0.94
IRF3-221ENST00000598808 CHP1Q99653 195 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 FOXQ1Q9C009 403 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 NHEJ1Q9H9Q4 299 aaPredicted RBP20.89■□□□□ 0.94
IRF3-221ENST00000598808 RRN3Q9NYV6 651 aa20.89■□□□□ 0.94
IRF3-221ENST00000598808 PRR33A8MZF0 331 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 NEDD8-MDP1E9PL57 170 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 MAN2B1O00754 1011 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 TRDMT1O14717 391 aaKnown RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 GREM1O60565 184 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 GJA4P35212 333 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 RING1Q06587 406 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 MAPK8IP2Q13387 824 aaPredicted RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 NNTQ13423 1086 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 SLC25A52Q3SY17 297 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 ALKBH5Q6P6C2 394 aaKnown RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 RALGPS2Q86X27 583 aaPredicted RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 ADGRG2Q8IZP9 1017 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 VCPIP1Q96JH7 1222 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 FCRL2Q96LA5 508 aaPredicted RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 BBS2Q9BXC9 721 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 SPHK2Q9NRA0 654 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 PARVAQ9NVD7 372 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 SLC12A6Q9UHW9 1150 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 TMEM59LQ9UK28 342 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 TSPAN3O60637 253 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 CYBBP04839 570 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 MYBL1P10243 752 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 DESP17661 470 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 TFE3P19532 575 aaPredicted RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 GPD1P21695 349 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 CCR1P32246 355 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 CHKAP35790 457 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 GSCP56915 257 aaPredicted RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 GAD2Q05329 585 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 PON2Q15165 354 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 TRNP1Q6NT89 227 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 TMEM25Q86YD3 366 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 SUGP1Q8IWZ8 645 aaKnown RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 NAT16Q8N8M0 369 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 MSANTD3Q96H12 275 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 NPY6RQ99463 290 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 DDX23Q9BUQ8 820 aaKnown RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 RAPGEFL1Q9UHV5 662 aa20.88■□□□□ 0.93
IRF3-221ENST00000598808 MRPS17Q9Y2R5 130 aaKnown RBP20.88■□□□□ 0.93
IRF3-221ENST00000598808 KIF5CO60282 957 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 IGLV3-25P01717 112 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 IGLV3-27P01718 113 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 SLC2A3P11169 496 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 GLULP15104 373 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 COL9A1P20849 921 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 RFC1P35251 1148 aaPredicted RBP20.87■□□□□ 0.93
IRF3-221ENST00000598808 SPA17Q15506 151 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 SLC18A3Q16572 532 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 C15orf59Q2T9L4 293 aaPredicted RBP20.87■□□□□ 0.93
IRF3-221ENST00000598808 RHBDF2Q6PJF5 856 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 CHSY1Q86X52 802 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 ATP6V0D2Q8N8Y2 350 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 DESI2Q9BSY9 194 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 LUC7LQ9NQ29 371 aaKnown RBP20.87■□□□□ 0.93
IRF3-221ENST00000598808 PIGVQ9NUD9 493 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 PLK2Q9NYY3 685 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 SCINQ9Y6U3 715 aa20.87■□□□□ 0.93
IRF3-221ENST00000598808 KANSL1LA0AUZ9 987 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 C2CD4BA6NLJ0 364 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 SIGLEC16A6NMB1 481 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 ACSL4O60488 711 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 LCA5LO95447 670 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 RDXP35241 583 aaKnown RBP20.86■□□□□ 0.93
IRF3-221ENST00000598808 KDSRQ06136 332 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 OTUD1Q5VV17 481 aaPredicted RBP20.86■□□□□ 0.93
IRF3-221ENST00000598808 TXNDC11Q6PKC3 985 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 MYRIPQ8NFW9 859 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 DDI1Q8WTU0 396 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 EXOC4Q96A65 974 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 SLC39A13Q96H72 371 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 DDX50Q9BQ39 737 aaKnown RBP20.86■□□□□ 0.93
IRF3-221ENST00000598808 TSGA10Q9BZW7 698 aa20.86■□□□□ 0.93
IRF3-221ENST00000598808 THAP2Q9H0W7 228 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms