RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ZC3H12AQ5D1E8 599 aaKnown RBP14.4□□□□□ -0.1
UPF1-205ENST00000598209 C10orf76Q5T2E6 689 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 FAM102AQ5T9C2 384 aaPredicted RBP14.4□□□□□ -0.1
UPF1-205ENST00000598209 ZC3H14Q6PJT7 736 aaKnown RBP14.4□□□□□ -0.1
UPF1-205ENST00000598209 MMS22LQ6ZRQ5 1243 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 NUDT18Q6ZVK8 323 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 SLC30A5Q8TAD4 765 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 NELL1Q92832 810 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 AZIN2Q96A70 460 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 AGPAT1Q99943 283 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 FAM126AQ9BYI3 521 aaPredicted RBP14.4□□□□□ -0.1
UPF1-205ENST00000598209 SEPT11Q9NVA2 429 aaKnown RBP14.4□□□□□ -0.1
UPF1-205ENST00000598209 POLR3BQ9NW08 1133 aaPredicted RBP14.4□□□□□ -0.1
UPF1-205ENST00000598209 DDIT4Q9NX09 232 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 ZSCAN32Q9NX65 697 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 IFNKQ9P0W0 207 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 FBXO10Q9UK96 956 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 SLC8A2Q9UPR5 921 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 SYNJ2BP-COX16A0A087WUM0 186 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 GOLGA6L7A0A1B0GV03 622 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 LRRC53A6NM62 1247 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 GOLGA8SH3BPF8 625 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 MOCS2O96007 188 aaPredicted RBP14.39□□□□□ -0.11
UPF1-205ENST00000598209 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
UPF1-205ENST00000598209 UNGP13051 313 aaPredicted RBP14.39□□□□□ -0.11
UPF1-205ENST00000598209 MMP8P22894 467 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 HOXC13P31276 330 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 SLC6A4P31645 630 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 PBX1P40424 430 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 MATKP42679 507 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 KIR2DL1P43626 348 aaPredicted RBP14.39□□□□□ -0.11
UPF1-205ENST00000598209 NRLP54845 237 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 EIF4EBP2Q13542 120 aaPredicted RBP14.39□□□□□ -0.11
UPF1-205ENST00000598209 DMC1Q14565 340 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 ASIC2Q16515 512 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 CLEC16AQ2KHT3 1053 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 FAM133BQ5BKY9 247 aaKnown RBP14.39□□□□□ -0.11
UPF1-205ENST00000598209 EMC10Q5UCC4 262 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 NADSYN1Q6IA69 706 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 RFWD3Q6PCD5 774 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 SYT13Q7L8C5 426 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 IRF2BP2Q7Z5L9 587 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 CCDC33Q8N5R6 958 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 ZBTB44Q8NCP5 570 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 TMA16Q96EY4 203 aaKnown RBP14.39□□□□□ -0.11
UPF1-205ENST00000598209 DDX50Q9BQ39 737 aaKnown RBP14.39□□□□□ -0.11
UPF1-205ENST00000598209 C11orf70Q9BRQ4 267 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 TTYH3Q9C0H2 523 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.39□□□□□ -0.11
UPF1-205ENST00000598209 COX16Q9P0S2 106 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 CLEC4EQ9ULY5 219 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 PCDHGA2Q9Y5H1 932 aa14.39□□□□□ -0.11
UPF1-205ENST00000598209 PROB1E7EW31 1015 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 M0QYT0 321 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 KLF8O95600 359 aaPredicted RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 HOXD9P28356 352 aaPredicted RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 NSFP46459 744 aaKnown RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 FNTBP49356 437 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 SGSHP51688 502 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 CENPCQ03188 943 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 DMWDQ09019 674 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 NME3Q13232 169 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 HSF5Q4G112 596 aaPredicted RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 FIGNQ5HY92 759 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 PIK3R6Q5UE93 754 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 SFMBT2Q5VUG0 894 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 HEATR6Q6AI08 1181 aaKnown RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 ALLCQ8N6M5 410 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 ATP6V0D2Q8N8Y2 350 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 IL17RCQ8NAC3 791 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 TXNDC5Q8NBS9 432 aaKnown RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 ATRIPQ8WXE1 791 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 RNF34Q969K3 372 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 BTN2A3PQ96KV6 586 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 HHIPQ96QV1 700 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 NPY6RQ99463 290 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 NUP58Q9BVL2 599 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 SLC2A11Q9BYW1 496 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 IRX2Q9BZI1 471 aaPredicted RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 EDEM3Q9BZQ6 932 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 NUCKS1Q9H1E3 243 aaKnown RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 ZDHHC4Q9NPG8 344 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.38□□□□□ -0.11
UPF1-205ENST00000598209 RRN3Q9NYV6 651 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 XPO7Q9UIA9 1087 aaKnown RBP14.38□□□□□ -0.11
UPF1-205ENST00000598209 STAP1Q9ULZ2 295 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 MMP17Q9ULZ9 603 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 SLC27A6Q9Y2P4 619 aa14.38□□□□□ -0.11
UPF1-205ENST00000598209 PRRT4C9JH25 899 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 TBL1XO60907 577 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 LILRB5O75023 590 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 SLC2A3P11169 496 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 TFE3P19532 575 aaPredicted RBP14.37□□□□□ -0.11
UPF1-205ENST00000598209 TNFAIP3P21580 790 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 HOXA6P31267 233 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 CCR1P32246 355 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 FLT3P36888 993 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 SULT1E1P49888 294 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 PTP4A2Q12974 167 aa14.37□□□□□ -0.11
UPF1-205ENST00000598209 OTUD1Q5VV17 481 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms