RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SHC3Q92529 594 aa15.7■□□□□ 0.1
LIG1-215ENST00000597901 SPACA7Q96KW9 195 aa15.7■□□□□ 0.1
LIG1-215ENST00000597901 TUBGCP2Q9BSJ2 902 aa15.7■□□□□ 0.1
LIG1-215ENST00000597901 NDST4Q9H3R1 872 aa15.7■□□□□ 0.1
LIG1-215ENST00000597901 SIX2Q9NPC8 291 aa15.7■□□□□ 0.1
LIG1-215ENST00000597901 DNAJC12Q9UKB3 198 aa15.7■□□□□ 0.1
LIG1-215ENST00000597901 FOXN3O00409 490 aaPredicted RBP15.69■□□□□ 0.1
LIG1-215ENST00000597901 NPC1O15118 1278 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 PAPSS1O43252 624 aaPredicted RBP15.69■□□□□ 0.1
LIG1-215ENST00000597901 ACSL4O60488 711 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 HOXD9P28356 352 aaPredicted RBP15.69■□□□□ 0.1
LIG1-215ENST00000597901 SLC11A2P49281 568 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 LIMK1P53667 647 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 RING1Q06587 406 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 ENPP2Q13822 863 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 HSP90AA4PQ58FG1 418 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 SPDYCQ5MJ68 293 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 SYPL2Q5VXT5 272 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 NUGGCQ68CJ6 796 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 TMEM215Q68D42 235 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 IL31Q6EBC2 164 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 TCEAL6Q6IPX3 200 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 DPY19L2P1Q6NXN4 242 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 BEND5Q7L4P6 421 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 ANKS1BQ7Z6G8 1248 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 DQX1Q8TE96 717 aaKnown RBP15.69■□□□□ 0.1
LIG1-215ENST00000597901 TCEAL3Q969E4 200 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 FAM149B1Q96BN6 582 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 SAMSN1Q9NSI8 373 aaKnown RBP15.69■□□□□ 0.1
LIG1-215ENST00000597901 CALCOCO1Q9P1Z2 691 aa15.69■□□□□ 0.1
LIG1-215ENST00000597901 E5RJQ4 531 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 ZNF217O75362 1048 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 PRKCSHP14314 528 aaPredicted RBP15.68■□□□□ 0.1
LIG1-215ENST00000597901 NDUFV2P19404 249 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 HLA-FP30511 346 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 IL12RB1P42701 662 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 YWHAZP63104 245 aaKnown RBP15.68■□□□□ 0.1
LIG1-215ENST00000597901 PTK2Q05397 1052 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 KCNMA1Q12791 1236 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 E2F5Q15329 346 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 MIIPQ5JXC2 388 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 STPG1Q5TH74 334 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 PIK3R6Q5UE93 754 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 RFWD3Q6PCD5 774 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 DEFB119Q8N690 84 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 SORCS1Q8WY21 1168 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 PIGKQ92643 395 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 SLC39A13Q96H72 371 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 FCRL2Q96LA5 508 aaPredicted RBP15.68■□□□□ 0.1
LIG1-215ENST00000597901 MRGPRX1Q96LB2 322 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 IRX2Q9BZI1 471 aaPredicted RBP15.68■□□□□ 0.1
LIG1-215ENST00000597901 CIPCQ9C0C6 399 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 SLC6A17Q9H1V8 727 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 LHX5Q9H2C1 402 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 AJAP1Q9UKB5 411 aaPredicted RBP15.68■□□□□ 0.1
LIG1-215ENST00000597901 TLR6Q9Y2C9 796 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 SDK1Q7Z5N4 2213 aa15.68■□□□□ 0.1
LIG1-215ENST00000597901 CAPN9O14815 690 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 TM4SF5O14894 197 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 KHNYNO15037 678 aaKnown RBP15.67■□□□□ 0.1
LIG1-215ENST00000597901 SLC6A4P31645 630 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 CLCN1P35523 988 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 PTGER3P43115 390 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 SGSHP51688 502 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 ZNF234Q14588 700 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 EIF4HQ15056 248 aaKnown RBP15.67■□□□□ 0.1
LIG1-215ENST00000597901 TAF5Q15542 800 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
LIG1-215ENST00000597901 MPP7Q5T2T1 576 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 NADSYN1Q6IA69 706 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 SLC36A4Q6YBV0 504 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 ARMCX6Q7L4S7 300 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 CYP2U1Q7Z449 544 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 KIAA0907Q7Z7F0 614 aaPredicted RBP15.67■□□□□ 0.1
LIG1-215ENST00000597901 ADAM32Q8TC27 787 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 PPP1R13BQ96KQ4 1090 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 SERPINB11Q96P15 392 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 POPDC2Q9HBU9 364 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 TMEM74BQ9NUR3 256 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 TJP2Q9UDY2 1190 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 PCDHGC3Q9UN70 934 aa15.67■□□□□ 0.1
LIG1-215ENST00000597901 MYO16Q9Y6X6 1858 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 IGHV1OR15-9A0A0B4J2B8 117 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 PATE3B3GLJ2 98 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 KCNJ18B7U540 433 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 IRAK2O43187 625 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 SYNCRIPO60506 623 aaKnown RBP15.66■□□□□ 0.1
LIG1-215ENST00000597901 TBL1XO60907 577 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 KCNA4P22459 653 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 KRT9P35527 623 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 IRX4P78413 519 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 PDCLQ13371 301 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 NNTQ13423 1086 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 KCNJ12Q14500 433 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 STARD3Q14849 445 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 FUT11Q495W5 492 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 CHST9Q7L1S5 443 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 METTL3Q86U44 580 aaKnown RBP15.66■□□□□ 0.1
LIG1-215ENST00000597901 ADIPOR2Q86V24 386 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 SLC47A2Q86VL8 602 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms