RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ANP32AP39687 249 aaKnown RBP12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 TPMTP51580 245 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 BCAT1P54687 386 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 ANKRD40Q6AI12 368 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 PM20D1Q6GTS8 502 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 FAM124AQ86V42 546 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 TMPRSS6Q8IU80 811 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 FAM217AQ8IXS0 508 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 ZC3H3Q8IXZ2 948 aaKnown RBP12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 UBR7Q8N806 425 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 WFDC5Q8TCV5 224 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 CYB5D2Q8WUJ1 264 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 PLD4Q96BZ4 506 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 SCAND2PQ9GZW5 306 aaPredicted RBP12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 DNAAF2Q9NVR5 837 aaKnown RBP12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 ELOVL2Q9NXB9 296 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 STRIP2Q9ULQ0 834 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 SLCO1B1Q9Y6L6 691 aa12.65□□□□□ -0.38
SOX2-OT-228ENST00000597828 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 SHROOM3Q8TF72 1996 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 UPK3BL1B0FP48 263 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 UPK3BL2E5RIL1 263 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 SH3BP5O60239 455 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 GABBR2O75899 941 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 CYBBP04839 570 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 EPHX1P07099 455 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 LCP1P13796 627 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 HLA-FP30511 346 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 RGS7P49802 495 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 BST2Q10589 180 aaKnown RBP12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 TRIP4Q15650 581 aaPredicted RBP12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 ZNF658Q5TYW1 1059 aaPredicted RBP12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 DCAF12L1Q5VU92 463 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 RABEPKQ7Z6M1 372 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 FMR1NBQ8N0W7 255 aaPredicted RBP12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 ARHGAP18Q8N392 663 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 KDF1Q8NAX2 398 aaPredicted RBP12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 CLEC4CQ8WTT0 213 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 UCMAQ8WVF2 138 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 ZCCHC14Q8WYQ9 949 aaKnown RBP12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 TFAP2BQ92481 460 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 KAT5Q92993 513 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 SIPA1Q96FS4 1042 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 DNAI2Q9GZS0 605 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 MIR1-1HGQ9H1L0 117 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 IL21RQ9HBE5 538 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 LRRC4Q9HBW1 653 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 ITM2CQ9NQX7 267 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 COQ4Q9Y3A0 265 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 NEUROG3Q9Y4Z2 214 aa12.64□□□□□ -0.39
SOX2-OT-228ENST00000597828 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 O00370 1275 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 SLC16A3O15427 465 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 STX10O60499 249 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 SYPP08247 313 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 DAOAP59103 153 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 BNC1Q01954 994 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 EIF4HQ15056 248 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 WDR45BQ5MNZ6 344 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 SYCP2LQ5T4T6 812 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 BSPRYQ5W0U4 402 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 ISM2Q6H9L7 571 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 SERPINA13PQ6UXR4 307 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 CHST9Q7L1S5 443 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 NAXDQ8IW45 347 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 TTC39CQ8N584 583 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 PNPLA1Q8N8W4 532 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 DNASE2BQ8WZ79 361 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 PRCCQ92733 491 aaPredicted RBP12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 FOXJ1Q92949 421 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 SLC35C1Q96A29 364 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 FAXDC2Q96IV6 333 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 IPO9Q96P70 1041 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 TSG101Q99816 390 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 ZSWIM1Q9BR11 485 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 SUSD2Q9UGT4 822 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 EIF2B4Q9UI10 523 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 PKD1L2Q7Z442 2459 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 FREM2Q5SZK8 3169 aa12.63□□□□□ -0.39
SOX2-OT-228ENST00000597828 A0A1B0GTW7 788 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 RNF225M0QZC1 329 aaPredicted RBP12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 SYNCRIPO60506 623 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 GNSP15586 552 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 SLC6A4P31645 630 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 SLC8A3P57103 927 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 PKDCCQ504Y2 493 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 FNDC3BQ53EP0 1204 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 MPPE1Q53F39 396 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 RFWD3Q6PCD5 774 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 TMEM270Q6UE05 265 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 LAYNQ6UX15 382 aa12.62□□□□□ -0.39
SOX2-OT-228ENST00000597828 ADIPOR2Q86V24 386 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms