RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 CHPFQ8IZ52 775 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 OR2I1PQ8NGU4 316 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 ADAM32Q8TC27 787 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 KCNV2Q8TDN2 545 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 PIGKQ92643 395 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 FCRL2Q96LA5 508 aaPredicted RBP10.94□□□□□ -0.66
LIG1-213ENST00000596672 PRICKLE1Q96MT3 831 aaPredicted RBP10.94□□□□□ -0.66
LIG1-213ENST00000596672 XPO6Q96QU8 1125 aaKnown RBP10.94□□□□□ -0.66
LIG1-213ENST00000596672 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 ADAM33Q9BZ11 813 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 MIS12Q9H081 205 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 MTG2Q9H4K7 406 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 POLMQ9NP87 494 aaPredicted RBP10.94□□□□□ -0.66
LIG1-213ENST00000596672 UBE2TQ9NPD8 197 aaPredicted RBP10.94□□□□□ -0.66
LIG1-213ENST00000596672 CNGB3Q9NQW8 809 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 HESX1Q9UBX0 185 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 RWDD2AQ9UIY3 292 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 KIAA1257Q9ULG3 409 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 PKD1L2Q7Z442 2459 aa10.94□□□□□ -0.66
LIG1-213ENST00000596672 TOP3BO95985 862 aaKnown RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 LTFP02788 710 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 ADRB1P08588 477 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 HLA-EP13747 358 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 PON1P27169 355 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 CD70P32970 193 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 UBE2HP62256 183 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 EIF4EBP2Q13542 120 aaPredicted RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 ZNF234Q14588 700 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 ELF2Q15723 593 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 DPCR1Q3MIW9 517 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 MIIPQ5JXC2 388 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 ARTNQ5T4W7 220 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 PEAR1Q5VY43 1037 aaPredicted RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 TRIM65Q6PJ69 517 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 ARHGAP18Q8N392 663 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 ZNF366Q8N895 744 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 CCDC26Q8TAB7 109 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 DQX1Q8TE96 717 aaKnown RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 CYB5D2Q8WUJ1 264 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 ZNF606Q8WXB4 792 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 PLD4Q96BZ4 506 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 MYO19Q96H55 970 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 SLC39A13Q96H72 371 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 HSFY1Q96LI6 401 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 CNTNAP3BQ96NU0 1288 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 EDEM2Q9BV94 578 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 LSM14BQ9BX40 385 aaKnown RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 CNTNAP3Q9BZ76 1288 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 GTPBP4Q9BZE4 634 aaKnown RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 DCLK3Q9C098 648 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 CLSTN2Q9H4D0 955 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 ELOVL2Q9NXB9 296 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 BCCIPQ9P287 314 aaKnown RBP eCLIP10.93□□□□□ -0.66
LIG1-213ENST00000596672 HOOK1Q9UJC3 728 aaKnown RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 PILRBQ9UKJ0 227 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 INTS6Q9UL03 887 aaKnown RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 CYP8B1Q9UNU6 501 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.93□□□□□ -0.66
LIG1-213ENST00000596672 ANKRD11Q6UB99 2663 aaPredicted RBP10.93□□□□□ -0.66
LIG1-213ENST00000596672 DMXL2Q8TDJ6 3036 aa10.93□□□□□ -0.66
LIG1-213ENST00000596672 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
LIG1-213ENST00000596672 FAM170AA1A519 330 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 BICDL2A1A5D9 508 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 ALDH1A2O94788 518 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 IGLV3-25P01717 112 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 NCAM1P13591 858 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 PPP1R2P41236 205 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 YWHAEP62258 255 aaKnown RBP10.92□□□□□ -0.66
LIG1-213ENST00000596672 GOLGA8FQ08AF8 430 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 GOLGA8DPQ0D2H9 430 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 KCNMA1Q12791 1236 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 HSP90AA4PQ58FG1 418 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 FSCBQ5H9T9 825 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 ADGRF1Q5T601 910 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 PIK3R6Q5UE93 754 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 MMS22LQ6ZRQ5 1243 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 CYP2U1Q7Z449 544 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 TAC4Q86UU9 113 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 SIX6OS1Q8N1H7 587 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 PGBD3Q8N328 593 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 TRIML1Q8N9V2 468 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 C12orf50Q8NA57 414 aaPredicted RBP10.92□□□□□ -0.66
LIG1-213ENST00000596672 DDI1Q8WTU0 396 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 IRGQQ8WZA9 623 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 SHC3Q92529 594 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 CDK5RAP1Q96SZ6 601 aaKnown RBP10.92□□□□□ -0.66
LIG1-213ENST00000596672 NUCKS1Q9H1E3 243 aaKnown RBP10.92□□□□□ -0.66
LIG1-213ENST00000596672 ABCC13Q9NSE7 274 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 STRIP2Q9ULQ0 834 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 WASF3Q9UPY6 502 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 ZNF510Q9Y2H8 683 aa10.92□□□□□ -0.66
LIG1-213ENST00000596672 ZFHX4Q86UP3 3567 aa10.91□□□□□ -0.66
LIG1-213ENST00000596672 ARID1BQ8NFD5 2236 aaPredicted RBP10.91□□□□□ -0.66
LIG1-213ENST00000596672 E5RJQ4 531 aa10.91□□□□□ -0.66
LIG1-213ENST00000596672 GOLGA6L22H0YM25 854 aa10.91□□□□□ -0.66
LIG1-213ENST00000596672 I6L893 689 aaPredicted RBP10.91□□□□□ -0.66
LIG1-213ENST00000596672 FOXN3O00409 490 aaPredicted RBP10.91□□□□□ -0.66
LIG1-213ENST00000596672 LETM1O95202 739 aaPredicted RBP10.91□□□□□ -0.66
LIG1-213ENST00000596672 KCNK5O95279 499 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms