RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 TBCBQ99426 244 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 CHP1Q99653 195 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 P2RY13Q9BPV8 354 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 LRFN3Q9BTN0 628 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 BBS2Q9BXC9 721 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 OSBPL6Q9BZF3 934 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 DEF6Q9H4E7 631 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 PARVAQ9NVD7 372 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 TMEM51Q9NW97 253 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 MARK1Q9P0L2 795 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 SLC12A6Q9UHW9 1150 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 SIT1Q9Y3P8 196 aa14.92□□□□□ -0.02
LIG1-208ENST00000595758 MTF2Q9Y483 593 aaPredicted RBP14.92□□□□□ -0.02
LIG1-208ENST00000595758 COL4A3Q01955 1670 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 KCNU1A8MYU2 1149 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 NEDD8-MDP1E9PL57 170 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 NCAM2O15394 837 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 PI15O43692 258 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 AKR1B10O60218 316 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 MOCS2O96007 188 aaPredicted RBP14.91□□□□□ -0.02
LIG1-208ENST00000595758 CYBBP04839 570 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 MYBL1P10243 752 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 TFE3P19532 575 aaPredicted RBP14.91□□□□□ -0.02
LIG1-208ENST00000595758 AOC1P19801 751 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 ABCB4P21439 1286 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 TARSP26639 723 aaKnown RBP14.91□□□□□ -0.02
LIG1-208ENST00000595758 SDC4P31431 198 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 DEUP1Q05D60 604 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 GRSF1Q12849 480 aaKnown RBP eCLIP14.91□□□□□ -0.02
LIG1-208ENST00000595758 MAMLD1Q13495 774 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 PPP2R5DQ14738 602 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 PPP1R15BQ5SWA1 713 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 NAIF1Q69YI7 327 aaPredicted RBP14.91□□□□□ -0.02
LIG1-208ENST00000595758 PLEKHA7Q6IQ23 1121 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 ALKBH5Q6P6C2 394 aaKnown RBP14.91□□□□□ -0.02
LIG1-208ENST00000595758 DCUN1D2Q6PH85 259 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 ATP6V0D2Q8N8Y2 350 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 CD101Q93033 1021 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 ZNF653Q96CK0 615 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 PGAP3Q96FM1 320 aaPredicted RBP14.91□□□□□ -0.02
LIG1-208ENST00000595758 BTN2A3PQ96KV6 586 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 CCDC42Q96M95 316 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 CFAP57Q96MR6 1250 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 DDX50Q9BQ39 737 aaKnown RBP14.91□□□□□ -0.02
LIG1-208ENST00000595758 ADAM33Q9BZ11 813 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 PIGVQ9NUD9 493 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 CALCOCO1Q9P1Z2 691 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 CNOT8Q9UFF9 292 aaKnown RBP14.91□□□□□ -0.02
LIG1-208ENST00000595758 PAXBP1Q9Y5B6 917 aa14.91□□□□□ -0.02
LIG1-208ENST00000595758 GOLGA6L7A0A1B0GV03 622 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 ATMINO43313 823 aaPredicted RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 TSPAN3O60637 253 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 TYRP14679 529 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 GPD1P21695 349 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 CDC25BP30305 580 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 OPRD1P41143 372 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 PTPN9P43378 593 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 SLC6A11P48066 632 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 CXCR3P49682 368 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 RPL7AP62424 266 aaKnown RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 ATP11AP98196 1134 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 GFPT1Q06210 699 aaPredicted RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 MTA1Q13330 715 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 SLC18A3Q16572 532 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 ASTE1Q2TB18 679 aaPredicted RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 CCDC14Q49A88 953 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 FAM133BQ5BKY9 247 aaKnown RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 TMEM196Q5HYL7 178 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 CCDC105Q8IYK2 499 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 ZNF687Q8N1G0 1237 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 NAT16Q8N8M0 369 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 DDI1Q8WTU0 396 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 BHMTQ93088 406 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 TMA16Q96EY4 203 aaKnown RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 MCEEQ96PE7 176 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 XPO6Q96QU8 1125 aaKnown RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 WDCPQ9H6R7 721 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 NHEJ1Q9H9Q4 299 aaPredicted RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 FBRSL1Q9HCM7 1045 aaKnown RBP14.9□□□□□ -0.02
LIG1-208ENST00000595758 MYO1AQ9UBC5 1043 aa14.9□□□□□ -0.02
LIG1-208ENST00000595758 MYOFQ9NZM1 2061 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 GFRA2O00451 464 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 ENDOD1O94919 500 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 PENKP01210 267 aaPredicted RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 DCNP07585 359 aaKnown RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 CHRNB1P11230 501 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 DRD1P21728 446 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 AVPR2P30518 371 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 RDXP35241 583 aaKnown RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 EIF2DP41214 584 aaKnown RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 ZNF143P52747 638 aaPredicted RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 FZD5Q13467 585 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 LRRC32Q14392 662 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 CDO1Q16878 200 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 C15orf59Q2T9L4 293 aaPredicted RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 MPPE1Q53F39 396 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 DGKKQ5KSL6 1271 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 BRMS1LQ5PSV4 323 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 FYB2Q5VWT5 728 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms