RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 MYEOVQ96EZ4 313 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 CFAP57Q96MR6 1250 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 TBCBQ99426 244 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 NPY6RQ99463 290 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 RAB6CQ9H0N0 254 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 CHRDQ9H2X0 955 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 POLR3BQ9NW08 1133 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 C2orf42Q9NWW7 574 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 MARK1Q9P0L2 795 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 CLEC4EQ9ULY5 219 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 CACNG3O60359 315 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 ACSL4O60488 711 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 SERPING1P05155 500 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 CALB1P05937 261 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 HOXC13P31276 330 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 CHKAP35790 457 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 RPS9P46781 194 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 SEC13P55735 322 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 DGKKQ5KSL6 1271 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 ADGRF1Q5T601 910 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 TMC6Q7Z403 805 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 UNC45BQ8IWX7 931 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 MCOLN2Q8IZK6 566 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 SYN2Q92777 582 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 IQCDQ96DY2 449 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 PNKPQ96T60 521 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 NUCKS1Q9H1E3 243 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 ZDHHC4Q9NPG8 344 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 ARHGEF4Q9NR80 690 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 PIGVQ9NUD9 493 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 DNAJC17Q9NVM6 304 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 SPATA6Q9NWH7 488 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 ARHGAP20Q9P2F6 1191 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 WDR35Q9P2L0 1181 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 STOML2Q9UJZ1 356 aa14.32□□□□□ -0.12
SHKBP1-207ENST00000595631 NYNRINQ9P2P1 1898 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 TCRBV5S1A1TA0A578 114 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 KCNU1A8MYU2 1149 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 K7EQS6 105 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 GFRA2O00451 464 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 RNF40O75150 1001 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 KAT7O95251 611 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 LATS1O95835 1130 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 PENKP01210 267 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 APOEP02649 317 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 DRD1P21728 446 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 RRM1P23921 792 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 GBP1P32455 592 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 GGCXP38435 758 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 SLC11A2P49281 568 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 ADKP55263 362 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 GSCP56915 257 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 TCF15Q12870 199 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 C15orf59Q2T9L4 293 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 SH3PXD2AQ5TCZ1 1133 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 RAP1GAP2Q684P5 730 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 WDR59Q6PJI9 974 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 C3orf20Q8ND61 904 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 DDI1Q8WTU0 396 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 RXFP2Q8WXD0 754 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 RNF34Q969K3 372 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 NT5C3BQ969T7 300 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 PRICKLE1Q96MT3 831 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 ANLNQ9NQW6 1124 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 TMPRSS4Q9NRS4 437 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 STAP1Q9ULZ2 295 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 HCN4Q9Y3Q4 1203 aa14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 MUC22E2RYF6 1773 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-207ENST00000595631 A0A087X0T9 212 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 C2CD4BA6NLJ0 364 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 I6L893 689 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 ADCY5O95622 1261 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 FTLP02792 175 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 APODP05090 189 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 FAM228BP0C875 321 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 HOXD9P28356 352 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 RFC1P35251 1148 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 EIF2DP41214 584 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 ZNF75DP51815 510 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 RPL7AP62424 266 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 ATP11AP98196 1134 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 SATB1Q01826 763 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 DEUP1Q05D60 604 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 TBX2Q13207 712 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 TRIM14Q14142 442 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 ANGPT1Q15389 498 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 CDO1Q16878 200 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 SLC25A52Q3SY17 297 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 EMC10Q5UCC4 262 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 PIK3R6Q5UE93 754 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 GRAMD4Q6IC98 578 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 DNAJC24Q6P3W2 148 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 TSSK4Q6SA08 328 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 MAML2Q8IZL2 1156 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 CFAP52Q8N1V2 620 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 WFDC5Q8TCV5 224 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 AZIN2Q96A70 460 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms