RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 NUGGCQ68CJ6 796 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 ANO7Q6IWH7 933 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 TMEM92Q6UXU6 159 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 CEP68Q76N32 757 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 BEND5Q7L4P6 421 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 TRMT11Q7Z4G4 463 aaKnown RBP15.74■□□□□ 0.11
TRIM28-205ENST00000595028 RASSF3Q86WH2 238 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 WDTC1Q8N5D0 677 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 C1orf131Q8NDD1 294 aaKnown RBP15.74■□□□□ 0.11
TRIM28-205ENST00000595028 PIWIL1Q96J94 861 aaKnown RBP15.74■□□□□ 0.11
TRIM28-205ENST00000595028 SERPINB11Q96P15 392 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 NOX5Q96PH1 765 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 CPXM1Q96SM3 734 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 VPS16Q9H269 839 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 GANQ9H2C0 597 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 LHX5Q9H2C1 402 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 PLCB1Q9NQ66 1216 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 TJP2Q9UDY2 1190 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 FBXO10Q9UK96 956 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 HCN2Q9UL51 889 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 STARD13Q9Y3M8 1113 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 PLXND1Q9Y4D7 1925 aa15.74■□□□□ 0.11
TRIM28-205ENST00000595028 PRRT4C9JH25 899 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 F8VZ95 297 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 GFRA2O00451 464 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 TBX4P57082 545 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 BPIFB4P59827 614 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 FKBP15Q5T1M5 1219 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 EGFLAMQ63HQ2 1017 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.73■□□□□ 0.11
TRIM28-205ENST00000595028 TAC4Q86UU9 113 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 ANKRD20A12PQ8NF67 263 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 PPP1R13BQ96KQ4 1090 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 POPDC2Q9HBU9 364 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 NAALADL1Q9UQQ1 740 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 SLC27A6Q9Y2P4 619 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 RALGAPA1Q6GYQ0 2036 aa15.73■□□□□ 0.11
TRIM28-205ENST00000595028 CAPN9O14815 690 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 CYP11B1P15538 503 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 ZNF18P17022 549 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 HOXD9P28356 352 aaPredicted RBP15.72■□□□□ 0.11
TRIM28-205ENST00000595028 PMLP29590 882 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 KRT9P35527 623 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 COPB1P53618 953 aaKnown RBP15.72■□□□□ 0.11
TRIM28-205ENST00000595028 NCAPHQ15003 741 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 MPPE1Q53F39 396 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 ADGRF1Q5T601 910 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 ANKS1BQ7Z6G8 1248 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 UNC45BQ8IWX7 931 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 MDGA1Q8NFP4 955 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 IPO4Q8TEX9 1081 aaKnown RBP15.72■□□□□ 0.11
TRIM28-205ENST00000595028 DDI1Q8WTU0 396 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 FCRL2Q96LA5 508 aaPredicted RBP15.72■□□□□ 0.11
TRIM28-205ENST00000595028 STK33Q9BYT3 514 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 POLMQ9NP87 494 aaPredicted RBP15.72■□□□□ 0.11
TRIM28-205ENST00000595028 LIMA1Q9UHB6 759 aaKnown RBP15.72■□□□□ 0.11
TRIM28-205ENST00000595028 CEP83Q9Y592 693 aa15.72■□□□□ 0.11
TRIM28-205ENST00000595028 MUC22E2RYF6 1773 aaPredicted RBP15.72■□□□□ 0.11
TRIM28-205ENST00000595028 LGALS16A8MUM7 142 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 IRAK2O43187 625 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 ALDH1A2O94788 518 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 IGLV3-25P01717 112 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 ERBB2P04626 1255 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 RETP07949 1114 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 HOXB2P14652 356 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 KLK7P49862 253 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 YWHAZP63104 245 aaKnown RBP15.71■□□□□ 0.11
TRIM28-205ENST00000595028 PTPN20Q4JDL3 420 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 FAM133BQ5BKY9 247 aaKnown RBP15.71■□□□□ 0.11
TRIM28-205ENST00000595028 SYPL2Q5VXT5 272 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 CAVIN1Q6NZI2 390 aaKnown RBP15.71■□□□□ 0.11
TRIM28-205ENST00000595028 FAM183BPQ6ZVS7 135 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 FAM160A2Q8N612 972 aaPredicted RBP15.71■□□□□ 0.11
TRIM28-205ENST00000595028 AOPEPQ8N6M6 819 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 ADAM32Q8TC27 787 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 AZIN2Q96A70 460 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 SLC39A13Q96H72 371 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 SLC2A11Q9BYW1 496 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 TPSD1Q9BZJ3 242 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 HSD3B7Q9H2F3 369 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 ASNSD1Q9NWL6 643 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 CLEC4EQ9ULY5 219 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 TLR6Q9Y2C9 796 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 SIK3Q9Y2K2 1263 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 DAAM1Q9Y4D1 1078 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 CKAP5Q14008 2032 aa15.71■□□□□ 0.11
TRIM28-205ENST00000595028 TCRBV21S2A2A0A5A6 115 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 EPHB6O15197 1021 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 GDF9O60383 454 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 ACSL4O60488 711 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 TSPAN3O60637 253 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 HSF2BPO75031 334 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 LRP3O75074 770 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 GLI1P08151 1106 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 NTSR1P30989 418 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 CDH5P33151 784 aaPredicted RBP15.7■□□□□ 0.1
TRIM28-205ENST00000595028 SLC11A2P49281 568 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 TAF5Q15542 800 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 GEN1Q17RS7 908 aa15.7■□□□□ 0.1
TRIM28-205ENST00000595028 ANO6Q4KMQ2 910 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms