RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PPP1R12CQ9BZL4 782 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 AGO3Q9H9G7 860 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 G3BP2Q9UN86 482 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 TIMM13Q9Y5L4 95 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 COMMD3-BMI1R4GMX3 469 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 DESP17661 470 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 CLCNKBP51801 687 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 GAD2Q05329 585 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 SFSWAPQ12872 951 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 MTA1Q13330 715 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 MORF4L2Q15014 288 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 KCNA10Q16322 511 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 BOLA3Q53S33 107 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 LIMS2Q7Z4I7 341 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 MAP7D3Q8IWC1 876 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 TOP6BLQ8N6T0 577 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 PPFIBP2Q8ND30 876 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 STKLD1Q8NE28 680 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 HAPLN3Q96S86 360 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 SAR1AQ9NR31 198 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 MIOSQ9NXC5 875 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 TBK1Q9UHD2 729 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 HEY1Q9Y5J3 304 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 PDCD11Q14690 1871 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 ENDOD1O94919 500 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 IL4RP24394 825 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 LRPAP1P30533 357 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 RPL22P35268 128 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 CNPY1Q3B7I2 92 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 ACBD5Q5T8D3 534 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 DARS2Q6PI48 645 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 RNF157Q96PX1 679 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 SPATA16Q9BXB7 569 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 FRMD8P1Q9BZ68 369 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 LGALS13Q9UHV8 139 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 BLOC1S6Q9UL45 172 aa17.65■□□□□ 0.42
SHKBP1-205ENST00000594973 ARL5CA6NH57 179 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 HGSO14964 777 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 ADAMTS4O75173 837 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 BANF1O75531 89 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 BEST1O76090 585 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 THP07101 528 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 WARSP23381 471 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 SLC34A1Q06495 639 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 AP1B1Q10567 949 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 ANKRD22Q5VYY1 191 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 RGS9BPQ6ZS82 235 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 SLC26A9Q7LBE3 791 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 PIGZQ86VD9 579 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 ZBED8Q8IZ13 594 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 MAGEB5Q9BZ81 275 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 DNAI2Q9GZS0 605 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 UPF3AQ9H1J1 476 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 PCDH18Q9HCL0 1135 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 DDX43Q9NXZ2 648 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 IL1RAPL1Q9NZN1 696 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 SCN10AQ9Y5Y9 1956 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 CASTOR2A6NHX0 329 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 PTPN1P18031 435 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 CD52P31358 61 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 SCNN1GP51170 649 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 RABGGTBP53611 331 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 ROR1Q01973 937 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 ADIGQ0VDE8 80 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 LSAMPQ13449 338 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 TFDP2Q14188 446 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 MDH1BQ5I0G3 518 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 LRRC74BQ6ZQY2 392 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 ZNF513Q8N8E2 541 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 LRRN4Q8WUT4 740 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 FAM149B1Q96BN6 582 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 SENP8Q96LD8 212 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 MED10Q9BTT4 135 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 MLXIPLQ9NP71 852 aa17.64■□□□□ 0.41
SHKBP1-205ENST00000594973 H7C0C1 242 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 TPP2P29144 1249 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 ATP5OP48047 213 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 PDK2Q15119 407 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 KHDC1Q4VXA5 237 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 SYCP2LQ5T4T6 812 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 C1QTNF12Q5T7M4 302 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 RASIP1Q5U651 963 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 KIAA0319Q5VV43 1072 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 RELL1Q8IUW5 271 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 CCNJLQ8IV13 435 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 HACE1Q8IYU2 909 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 CPT1BQ92523 772 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 PAAF1Q9BRP4 392 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 FOXP3Q9BZS1 431 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 MMADHCQ9H3L0 296 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 SLC38A7Q9NVC3 462 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 SHOC2Q9UQ13 582 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 FOXN2P32314 431 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 ACADSBP45954 432 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 BASP1P80723 227 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 PDIA2Q13087 525 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 NOMO1Q15155 1222 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 ANKMY2Q8IV38 441 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 PQLC3Q8N755 202 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms