RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 LRFN3Q9BTN0 628 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 ZNF510Q9Y2H8 683 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 CTAGE15A4D2H0 777 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 MSI1O43347 362 aaKnown RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 GRAP2O75791 330 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 CTAGE8P0CG41 777 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 CD72P21854 359 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 CTHP32929 405 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 AMPD2Q01433 879 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 TRIP4Q15650 581 aaPredicted RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 DCAF6Q58WW2 860 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 Q6ZNB5 142 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 CTAGE6Q86UF2 777 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 CTAGE4Q8IX94 777 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 FAM71BQ8TC56 605 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 SLC2A13Q96QE2 648 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 ACBD3Q9H3P7 528 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 MRPS17Q9Y2R5 130 aaKnown RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 BZW2Q9Y6E2 419 aaKnown RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 KLKB1P03952 638 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 CORO1AP31146 461 aaKnown RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 ARHGAP25P42331 645 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 HARS2P49590 506 aaKnown RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 FAM102AQ5T9C2 384 aaPredicted RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 ZNF571Q7Z3V5 609 aaPredicted RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 PHF13Q86YI8 300 aaPredicted RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 SUGP1Q8IWZ8 645 aaKnown RBP20.41■□□□□ 0.86
LSM4-203ENST00000593829 DEFB106AQ8N104 65 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 FAM3CQ92520 227 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 SERPINB11Q96P15 392 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 C11orf70Q9BRQ4 267 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 VIPAS39Q9H9C1 493 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 MED4Q9NPJ6 270 aa20.41■□□□□ 0.86
LSM4-203ENST00000593829 SHISA7A6NL88 538 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 DAB1O75553 588 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 CYP17A1P05093 508 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 LMAN1P49257 510 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 CLCN5P51795 746 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 NNTQ13423 1086 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 DHCR24Q15392 516 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 CWF19L1Q69YN2 538 aaKnown RBP20.4■□□□□ 0.86
LSM4-203ENST00000593829 ASTLQ6HA08 431 aaPredicted RBP20.4■□□□□ 0.86
LSM4-203ENST00000593829 NELL2Q99435 816 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 FOXQ1Q9C009 403 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 LTB4R2Q9NPC1 389 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 ABHD10Q9NUJ1 306 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 ADAM22Q9P0K1 906 aa20.4■□□□□ 0.86
LSM4-203ENST00000593829 GOLGA8SH3BPF8 625 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 ADH1CP00326 375 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 GJA4P35212 333 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 TBX4P57082 545 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 CDK17Q00537 523 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 UBXN2BQ14CS0 331 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 PPP1R2P3Q6NXS1 205 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 RHBDF2Q6PJF5 856 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 ZNF662Q6ZS27 426 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 DENND1CQ8IV53 801 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 ADAM32Q8TC27 787 aa20.39■□□□□ 0.86
LSM4-203ENST00000593829 AGO1Q9UL18 857 aaKnown RBP20.39■□□□□ 0.86
LSM4-203ENST00000593829 COL4A3Q01955 1670 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 TRUB2O95900 331 aaKnown RBP20.39■□□□□ 0.85
LSM4-203ENST00000593829 SERPING1P05155 500 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 CALB1P05937 261 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 RNASE9P60153 205 aaKnown RBP20.39■□□□□ 0.85
LSM4-203ENST00000593829 RING1Q06587 406 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 TDRD12Q587J7 1177 aaKnown RBP20.39■□□□□ 0.85
LSM4-203ENST00000593829 HGSNATQ68CP4 663 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 ACAD10Q6JQN1 1059 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 LEKR1Q6ZMV7 388 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 TAC4Q86UU9 113 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 UNC45BQ8IWX7 931 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 OLIG1Q8TAK6 271 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 OSBPL6Q9BZF3 934 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 SPHK2Q9NRA0 654 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 WDR35Q9P2L0 1181 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 TLR6Q9Y2C9 796 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 SIT1Q9Y3P8 196 aa20.39■□□□□ 0.85
LSM4-203ENST00000593829 FAM170BA6NMN3 283 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 IGLV3-27P01718 113 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 AOC1P19801 751 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 MCM3P25205 808 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 NOS2P35228 1153 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 MATKP42679 507 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 C1QBPQ07021 282 aaKnown RBP20.38■□□□□ 0.85
LSM4-203ENST00000593829 PTP4A2Q12974 167 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 CASP8Q14790 479 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 LY6G5CQ5SRR4 150 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 NUGGCQ68CJ6 796 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 TXNDC11Q6PKC3 985 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 PJA1Q8NG27 643 aa20.38■□□□□ 0.85
LSM4-203ENST00000593829 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.38■□□□□ 0.85
LSM4-203ENST00000593829 A0A0U1RQJ8 604 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 CHKAP35790 457 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 MON1BQ7L1V2 547 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 SRLQ86TD4 932 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 VPS36Q86VN1 386 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 OR8K1Q8NGG5 319 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 ATRIPQ8WXE1 791 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 CHFRQ96EP1 664 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 RASSF4Q9H2L5 321 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms