RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ADRA1DP25100 572 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
MBD1-227ENST00000592060 NEK3P51956 506 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 SLC18A2Q05940 514 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 SREBF2Q12772 1141 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 TRIM32Q13049 653 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 DSC3Q14574 896 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 PAFAH1B3Q15102 231 aaKnown RBP16.27■□□□□ 0.2
MBD1-227ENST00000592060 UPP1Q16831 310 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 ANKRD20A2Q5SQ80 823 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 ANKRD20A1Q5TYW2 823 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 ANKRD20A3Q5VUR7 823 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 UNC5AQ6ZN44 842 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 BZW1Q7L1Q6 419 aaKnown RBP16.27■□□□□ 0.2
MBD1-227ENST00000592060 BHLHA9Q7RTU4 235 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 TCP10LQ8TDR4 215 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 NTAN1Q96AB6 310 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 SLC9A7Q96T83 725 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 LGMNQ99538 433 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 KLF6Q99612 283 aaPredicted RBP16.27■□□□□ 0.2
MBD1-227ENST00000592060 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 WDR6Q9NNW5 1121 aaKnown RBP16.27■□□□□ 0.2
MBD1-227ENST00000592060 CNGB3Q9NQW8 809 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 SMYD2Q9NRG4 433 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 HAUS2Q9NVX0 235 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 COX16Q9P0S2 106 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 PHTF1Q9UMS5 762 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 CXorf49A8MYA2 514 aaPredicted RBP16.27■□□□□ 0.19
MBD1-227ENST00000592060 GOLGA8RI6L899 631 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 DCLK1O15075 740 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 APOEP02649 317 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 MT-ND3P03897 115 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 RPLP2P05387 115 aaKnown RBP16.27■□□□□ 0.19
MBD1-227ENST00000592060 ALADP13716 330 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 FDFT1P37268 417 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 FCGRTP55899 365 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 SCAPQ12770 1279 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 SEMA3BQ13214 749 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 TIGD5Q53EQ6 642 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 SLC26A11Q86WA9 606 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 MPP5Q8N3R9 675 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 LRRC8CQ8TDW0 803 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 APOPT1Q96IL0 206 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 KCNK16Q96T55 309 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 EBNA1BP2Q99848 306 aaKnown RBP16.27■□□□□ 0.19
MBD1-227ENST00000592060 SPC25Q9HBM1 224 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 XAB2Q9HCS7 855 aaKnown RBP16.27■□□□□ 0.19
MBD1-227ENST00000592060 SLCO1B3Q9NPD5 702 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 SLC17A7Q9P2U7 560 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 ZNF180Q9UJW8 692 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 IKBKGQ9Y6K9 419 aa16.27■□□□□ 0.19
MBD1-227ENST00000592060 I6L893 689 aaPredicted RBP16.26■□□□□ 0.19
MBD1-227ENST00000592060 CA12O43570 354 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 ZNF623O75123 536 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 GLUD2P49448 558 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 AIF1P55008 147 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 NME3Q13232 169 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 FAM133BQ5BKY9 247 aaKnown RBP16.26■□□□□ 0.19
MBD1-227ENST00000592060 DENND5BQ6ZUT9 1274 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 ECHDC2Q86YB7 292 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 ANKLE1Q8NAG6 615 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 SLC7A14Q8TBB6 771 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 ZNF75CPQ92670 426 aaPredicted RBP16.26■□□□□ 0.19
MBD1-227ENST00000592060 PGAP3Q96FM1 320 aaPredicted RBP16.26■□□□□ 0.19
MBD1-227ENST00000592060 ANLNQ9NQW6 1124 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 GGT7Q9UJ14 662 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 PADI3Q9ULW8 664 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 THSD7BQ9C0I4 1608 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 EEF2KO00418 725 aaKnown RBP16.26■□□□□ 0.19
MBD1-227ENST00000592060 AMHP03971 560 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 DHRS4L1P0CG22 281 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 CD52P31358 61 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 ADRA1BP35368 520 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 GRIA1P42261 906 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 FLT3LGP49771 235 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 RAB27AP51159 221 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 TTC39BQ5VTQ0 682 aaPredicted RBP16.26■□□□□ 0.19
MBD1-227ENST00000592060 CD300LGQ6UXG3 332 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 RFX8Q6ZV50 586 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 LRRC6Q86X45 466 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 PPM1NQ8N819 430 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 NETO2Q8NC67 525 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 GSDMBQ8TAX9 411 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 SMARCD1Q96GM5 515 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 ZIC5Q96T25 663 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 C12orf65Q9H3J6 166 aaKnown RBP16.26■□□□□ 0.19
MBD1-227ENST00000592060 RXFP1Q9HBX9 757 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 CSNK1G1Q9HCP0 422 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 EIF2B3Q9NR50 452 aaKnown RBP16.26■□□□□ 0.19
MBD1-227ENST00000592060 KLHL14Q9P2G3 628 aa16.26■□□□□ 0.19
MBD1-227ENST00000592060 FRMPD3Q5JV73 1810 aa16.25■□□□□ 0.19
MBD1-227ENST00000592060 FAM159BA6NKW6 160 aa16.25■□□□□ 0.19
MBD1-227ENST00000592060 RNF103O00237 685 aa16.25■□□□□ 0.19
MBD1-227ENST00000592060 CREB3O43889 395 aa16.25■□□□□ 0.19
MBD1-227ENST00000592060 OPHN1O60890 802 aa16.25■□□□□ 0.19
MBD1-227ENST00000592060 MLNP12872 115 aa16.25■□□□□ 0.19
MBD1-227ENST00000592060 PCSK1P29120 753 aa16.25■□□□□ 0.19
MBD1-227ENST00000592060 HNRNPH1P31943 449 aaKnown RBP16.25■□□□□ 0.19
MBD1-227ENST00000592060 THPOP40225 353 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms