RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 EIF4HQ15056 248 aaKnown RBP16.67■□□□□ 0.26
DDX39A-216ENST00000591275 TEAD4Q15561 434 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 KCNT1Q5JUK3 1230 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 C1orf220Q5T0J3 134 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 DHRS13Q6UX07 377 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 OR2T3Q8NH03 318 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 CYB5D2Q8WUJ1 264 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 CDK5RAP1Q96SZ6 601 aaKnown RBP16.67■□□□□ 0.26
DDX39A-216ENST00000591275 PCED1AQ9H1Q7 454 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 APOBEC3GQ9HC16 384 aaKnown RBP16.67■□□□□ 0.26
DDX39A-216ENST00000591275 CLIC5Q9NZA1 410 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 USP3Q9Y6I4 520 aa16.67■□□□□ 0.26
DDX39A-216ENST00000591275 SHROOM3Q8TF72 1996 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 A0A087WV48 116 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 SLC12A8A0AV02 714 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 H0Y8X5 98 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 FSBPO95073 299 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 PRB1P04280 392 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 GRK6P43250 576 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 CCT8P50990 548 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 STK4Q13043 487 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 CAMK2GQ13555 558 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-216ENST00000591275 SMAD1Q15797 465 aaKnown RBP16.66■□□□□ 0.26
DDX39A-216ENST00000591275 PTPRNQ16849 979 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 FNDC3BQ53EP0 1204 aaKnown RBP16.66■□□□□ 0.26
DDX39A-216ENST00000591275 PPP1R26Q5T8A7 1209 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-216ENST00000591275 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 RSRC2Q7L4I2 434 aaKnown RBP16.66■□□□□ 0.26
DDX39A-216ENST00000591275 SCUBE3Q8IX30 993 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 ZNF276Q8N554 614 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 BIRC7Q96CA5 298 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 DUSP16Q9BY84 665 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 BACH2Q9BYV9 841 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 MAGEF1Q9HAY2 307 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 MARCH2Q9P0N8 246 aa16.66■□□□□ 0.26
DDX39A-216ENST00000591275 TSPAN3O60637 253 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 SEMA4FO95754 770 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 NR3C1P04150 777 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 GRIA4P48058 902 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 E2F5Q15329 346 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 ZNF394Q53GI3 561 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 SLC9A9Q8IVB4 645 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 CPXM2Q8N436 756 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 PDCD7Q8N8D1 485 aaKnown RBP16.65■□□□□ 0.26
DDX39A-216ENST00000591275 KIAA0895Q8NCT3 520 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 PIP4K2CQ8TBX8 421 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 ADAM32Q8TC27 787 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 TMC2Q8TDI7 906 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 IGSF8Q969P0 613 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 ARID3AQ99856 593 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 SLC2A11Q9BYW1 496 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 STRIP2Q9ULQ0 834 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 PTPRQQ9UMZ3 2332 aa16.65■□□□□ 0.26
DDX39A-216ENST00000591275 PLK4O00444 970 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 TIMM44O43615 452 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 ABCG1P45844 678 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 CLDN6P56747 220 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 YWHAGP61981 247 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDX39A-216ENST00000591275 FOXD4L6Q3SYB3 417 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-216ENST00000591275 FOXD4L3Q6VB84 417 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-216ENST00000591275 ADAT2Q7Z6V5 191 aaKnown RBP16.64■□□□□ 0.25
DDX39A-216ENST00000591275 TAS1R2Q8TE23 839 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-216ENST00000591275 IMPG2Q9BZV3 1241 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 BTBD1Q9H0C5 482 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 TMEM245Q9H330 911 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 MMRN2Q9H8L6 949 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 FTSJ1Q9UET6 329 aa16.64■□□□□ 0.25
DDX39A-216ENST00000591275 TP53BP1Q12888 1972 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-216ENST00000591275 ZNF462Q96JM2 2506 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 IKBKBO14920 756 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 KLRC4O43908 158 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 PCDHGA12O60330 932 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 YEATS4O95619 227 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 TRIM49P0CI25 452 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 TRIM49CP0CI26 452 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 CD27P26842 260 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 ITPKBP27987 946 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 HOXD9P28356 352 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-216ENST00000591275 HLA-FP30511 346 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 CTSKP43235 329 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 GCLMP48507 274 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 VAMP7P51809 220 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 RPS14P62263 151 aaKnown RBP16.63■□□□□ 0.25
DDX39A-216ENST00000591275 MPPE1Q53F39 396 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 PRAMEF14Q5SWL7 426 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 FOXD4L5Q5VV16 416 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-216ENST00000591275 CHST9Q7L1S5 443 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 FAM217AQ8IXS0 508 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 ENGASEQ8NFI3 743 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 FOXD4L4Q8WXT5 416 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-216ENST00000591275 NDRG1Q92597 394 aaKnown RBP16.63■□□□□ 0.25
DDX39A-216ENST00000591275 HEXIM2Q96MH2 286 aaKnown RBP16.63■□□□□ 0.25
DDX39A-216ENST00000591275 NIF3L1Q9GZT8 377 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 OSGEPQ9NPF4 335 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 PRSS16Q9NQE7 514 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 ABCB8Q9NUT2 735 aa16.63■□□□□ 0.25
DDX39A-216ENST00000591275 EXOC1Q9NV70 894 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms