RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 HMBSP08397 361 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 IRF1P10914 325 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 PSMC3P17980 439 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 CORO1AP31146 461 aaKnown RBP12.52□□□□□ -0.41
APOC1-206ENST00000590334 NOP2P46087 812 aaKnown RBP12.52□□□□□ -0.41
APOC1-206ENST00000590334 SCAPQ12770 1279 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 MESDQ14696 234 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 IFI16Q16666 785 aaKnown RBP12.52□□□□□ -0.41
APOC1-206ENST00000590334 HS1BP3Q53T59 392 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 ZC3H12AQ5D1E8 599 aaKnown RBP12.52□□□□□ -0.41
APOC1-206ENST00000590334 ACBD5Q5T8D3 534 aaPredicted RBP12.52□□□□□ -0.41
APOC1-206ENST00000590334 C11orf63Q6NUN7 778 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 CYP4V2Q6ZWL3 525 aaPredicted RBP12.52□□□□□ -0.41
APOC1-206ENST00000590334 ATP6V0D2Q8N8Y2 350 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 TPCN2Q8NHX9 752 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 OSCP1Q8WVF1 389 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 NTAN1Q96AB6 310 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 HAPLN3Q96S86 360 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 KXD1Q9BQD3 176 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 RPP25Q9BUL9 199 aaKnown RBP12.52□□□□□ -0.41
APOC1-206ENST00000590334 KCNK12Q9HB15 430 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 THG1LQ9NWX6 298 aaKnown RBP12.52□□□□□ -0.41
APOC1-206ENST00000590334 COX16Q9P0S2 106 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 TBC1D14Q9P2M4 693 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 TRIM10Q9UDY6 481 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 LIMD1Q9UGP4 676 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 PYCARDQ9ULZ3 195 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 I6L893 689 aaPredicted RBP12.51□□□□□ -0.41
APOC1-206ENST00000590334 GFRA2O00451 464 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 SLC9A3R1O14745 358 aaPredicted RBP12.51□□□□□ -0.41
APOC1-206ENST00000590334 CHADO15335 359 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 ZSCAN12O43309 604 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 ACSL4O60488 711 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
APOC1-206ENST00000590334 MIPP30301 263 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 ADRA1BP35368 520 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 SLC1A1P43005 524 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 SLC11A2P49281 568 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 ARHGAP29Q52LW3 1261 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 ADGRF1Q5T601 910 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 CC2D1AQ6P1N0 951 aaPredicted RBP12.51□□□□□ -0.41
APOC1-206ENST00000590334 SLFN11Q7Z7L1 901 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 FAM131BQ86XD5 332 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
APOC1-206ENST00000590334 DENND1CQ8IV53 801 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 BBS7Q8IWZ6 715 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 CPXM2Q8N436 756 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 SLC44A3Q8N4M1 653 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 RNF34Q969K3 372 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 C1orf74Q96LT6 269 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 FAM83CQ9BQN1 747 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 IRX2Q9BZI1 471 aaPredicted RBP12.51□□□□□ -0.41
APOC1-206ENST00000590334 TKTL2Q9H0I9 626 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 ANLNQ9NQW6 1124 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 KCND1Q9NSA2 647 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 SLC12A6Q9UHW9 1150 aa12.51□□□□□ -0.41
APOC1-206ENST00000590334 ARNTLO00327 626 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 BUB1O43683 1085 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 CHKAP35790 457 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 MLLT6P55198 1093 aaPredicted RBP12.5□□□□□ -0.41
APOC1-206ENST00000590334 NRG1Q02297 640 aaPredicted RBP12.5□□□□□ -0.41
APOC1-206ENST00000590334 SLC25A11Q02978 314 aaKnown RBP12.5□□□□□ -0.41
APOC1-206ENST00000590334 PDGFRLQ15198 375 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 EML3Q32P44 896 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 ARL13BQ3SXY8 428 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 FAM133BQ5BKY9 247 aaKnown RBP12.5□□□□□ -0.41
APOC1-206ENST00000590334 ARTNQ5T4W7 220 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 DAB2IPQ5VWQ8 1189 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 NADSYN1Q6IA69 706 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.5□□□□□ -0.41
APOC1-206ENST00000590334 ADGRG2Q8IZP9 1017 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 CCDC185Q8N715 623 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 ST13P5Q8NFI4 369 aaPredicted RBP12.5□□□□□ -0.41
APOC1-206ENST00000590334 RSAD2Q8WXG1 361 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 ASIC4Q96FT7 647 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 PEBP4Q96S96 227 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 PRMT1Q99873 361 aaKnown RBP12.5□□□□□ -0.41
APOC1-206ENST00000590334 TRMT61BQ9BVS5 477 aaKnown RBP12.5□□□□□ -0.41
APOC1-206ENST00000590334 OSBPL2Q9H1P3 480 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 LZTFL1Q9NQ48 299 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 TRPV5Q9NQA5 729 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 DUS2Q9NX74 493 aaKnown RBP12.5□□□□□ -0.41
APOC1-206ENST00000590334 FZD10Q9ULW2 581 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 USP18Q9UMW8 372 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 ALG6Q9Y672 507 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 MYOFQ9NZM1 2061 aa12.5□□□□□ -0.41
APOC1-206ENST00000590334 MACROD2A1Z1Q3 448 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 GRID2IPA4D2P6 1211 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 PRPSAP2O60256 369 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 PAGE1O75459 146 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 MOCS3O95396 460 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 TCF4P15884 667 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 COMTP21964 271 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 IL1R2P27930 398 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 TDGQ13569 410 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 GRM2Q14416 872 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 C5orf22Q49AR2 442 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 BOLA3Q53S33 107 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms