RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 GLDCP23378 1020 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 HOXD13P35453 343 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 PLA2G4AP47712 749 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 MAP3K7CLP57077 242 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 RPS14P62263 151 aaKnown RBP8.36□□□□□ -1.07
VAT1-207ENST00000589828 RACK1P63244 317 aaKnown RBP8.36□□□□□ -1.07
VAT1-207ENST00000589828 KIAA0895LQ68EN5 471 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 SERPINA13PQ6UXR4 307 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 KANSL1Q7Z3B3 1105 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 ANKS1BQ7Z6G8 1248 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 ADAT2Q7Z6V5 191 aaKnown RBP8.36□□□□□ -1.07
VAT1-207ENST00000589828 SCD5Q86SK9 330 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 WDR49Q8IV35 697 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 DCBLD1Q8N8Z6 715 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 CYB5D2Q8WUJ1 264 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 UCMAQ8WVF2 138 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 RFFLQ8WZ73 363 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 ZDHHC16Q969W1 377 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 SMARCD1Q96GM5 515 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 BTBD1Q9H0C5 482 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 TMEM245Q9H330 911 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 CSNK1G1Q9HCP0 422 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 TLR8Q9NR97 1041 aaKnown RBP8.36□□□□□ -1.07
VAT1-207ENST00000589828 OLFML3Q9NRN5 406 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
VAT1-207ENST00000589828 SCML2Q9UQR0 700 aa8.36□□□□□ -1.07
VAT1-207ENST00000589828 A0A1W2PPC4 97 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 FRMD3A2A2Y4 597 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 C10orf142B7Z368 130 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 STAU1O95793 577 aaKnown RBP8.35□□□□□ -1.07
VAT1-207ENST00000589828 MT-CO3P00414 261 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 DLATP10515 647 aaKnown RBP8.35□□□□□ -1.07
VAT1-207ENST00000589828 GAP43P17677 238 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 EPHA8P29322 1005 aaPredicted RBP8.35□□□□□ -1.07
VAT1-207ENST00000589828 LONP1P36776 959 aaKnown RBP8.35□□□□□ -1.07
VAT1-207ENST00000589828 BCAT1P54687 386 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 C21orf59P57076 290 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 TNNC1P63316 161 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 KCNJ12Q14500 433 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 SURF1Q15526 300 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 COLEC12Q5KU26 742 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 C10orf120Q5SQS8 335 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 KLHDC10Q6PID8 442 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 KDM7AQ6ZMT4 941 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 ACOT1Q86TX2 421 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 ZC3H3Q8IXZ2 948 aaKnown RBP8.35□□□□□ -1.07
VAT1-207ENST00000589828 CACTIN-AS1Q8N1I8 211 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 RDH13Q8NBN7 331 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 ZNF248Q8NDW4 579 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 RASSF8Q8NHQ8 419 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 SLC2A14Q8TDB8 520 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 HPS3Q969F9 1004 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 JAKMIP2Q96AA8 810 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 HS3ST6Q96QI5 342 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 CGRRF1Q99675 332 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.35□□□□□ -1.07
VAT1-207ENST00000589828 ACE2Q9BYF1 805 aaPredicted RBP8.35□□□□□ -1.07
VAT1-207ENST00000589828 TRIM4Q9C037 500 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 MTG2Q9H4K7 406 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 PRSS16Q9NQE7 514 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 HSPBP1Q9NZL4 362 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 SERGEFQ9UGK8 458 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 HMGXB4Q9UGU5 601 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 AGO1Q9UL18 857 aaKnown RBP8.35□□□□□ -1.07
VAT1-207ENST00000589828 CLCA2Q9UQC9 943 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 MGAQ8IWI9 3026 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 SPTA1P02549 2419 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 NUMA1Q14980 2115 aa8.35□□□□□ -1.07
VAT1-207ENST00000589828 ATP8B3O60423 1300 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 MYH11P35749 1972 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 FAM47DPA6NHR8 397 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 KIAA0391O15091 583 aaKnown RBP8.34□□□□□ -1.07
VAT1-207ENST00000589828 MAP3K7O43318 606 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 MPOP05164 745 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 HMBSP08397 361 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 IDEP14735 1019 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 CKMT2P17540 419 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 TNNI1P19237 187 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 ABCB4P21439 1286 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 HLA-FP30511 346 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 CORO1AP31146 461 aaKnown RBP8.34□□□□□ -1.07
VAT1-207ENST00000589828 CSRP3P50461 194 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 GALCP54803 685 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 TMPRSS3P57727 454 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 CYP24A1Q07973 514 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 GOLGA8FQ08AF8 430 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 GOLGA8DPQ0D2H9 430 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 PSMD6Q15008 389 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 EIF4HQ15056 248 aaKnown RBP8.34□□□□□ -1.07
VAT1-207ENST00000589828 SFMBT2Q5VUG0 894 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 KIAA1614Q5VZ46 1190 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 NCEH1Q6PIU2 408 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 SCARA5Q6ZMJ2 495 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 DHX40Q8IX18 779 aaKnown RBP8.34□□□□□ -1.07
VAT1-207ENST00000589828 C12orf29Q8N999 325 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 PLEKHO2Q8TD55 490 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 SNRNP27Q8WVK2 155 aaKnown RBP8.34□□□□□ -1.07
VAT1-207ENST00000589828 CCDC127Q96BQ5 260 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 MED8Q96G25 268 aa8.34□□□□□ -1.07
VAT1-207ENST00000589828 ZSCAN31Q96LW9 406 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms