RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 WNT6Q9Y6F9 365 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 CUL9Q8IWT3 2517 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 SLC12A8A0AV02 714 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 E2F8A0AVK6 867 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 ENC1O14682 589 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 FYNP06241 537 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 PDGFRAP16234 1089 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 GPD1P21695 349 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 COMTP21964 271 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 PSMA2P25787 234 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 MAN1A1P33908 653 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 ZNF143P52747 638 aaPredicted RBP22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 DAB2IPQ5VWQ8 1189 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 TRIM67Q6ZTA4 783 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 NIPA2Q8N8Q9 360 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 ASIC4Q96FT7 647 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 FAM83CQ9BQN1 747 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 TRPV5Q9NQA5 729 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 SFMBT1Q9UHJ3 866 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 LCMT1Q9UIC8 334 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 PACSIN2Q9UNF0 486 aaPredicted RBP22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 NAALADL1Q9UQQ1 740 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 JRKLQ9Y4A0 524 aa22.11■■□□□ 1.13
R3HDM4-204ENST00000589428 ARNTLO00327 626 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 SCAMP3O14828 347 aaKnown RBP22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 ATP1A1P05023 1023 aaKnown RBP22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 HMBSP08397 361 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 CCDC14Q49A88 953 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 MEI1Q5TIA1 1274 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 PEX26Q7Z412 305 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 DQX1Q8TE96 717 aaKnown RBP22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 ZNF592Q92610 1267 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 CFAP57Q96MR6 1250 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 NAPGQ99747 312 aaPredicted RBP22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 CNPY3Q9BT09 278 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 TLR10Q9BXR5 811 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 ARHGEF3Q9NR81 526 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 TBC1D14Q9P2M4 693 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 CA14Q9ULX7 337 aa22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 HBS1LQ9Y450 684 aaKnown RBP22.1■■□□□ 1.13
R3HDM4-204ENST00000589428 CASQ1P31415 396 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 MATKP42679 507 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 KPNA1P52294 538 aaPredicted RBP22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 PIGHQ14442 188 aaPredicted RBP22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 DCAF6Q58WW2 860 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 TRIM68Q6AZZ1 485 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 DEFB106AQ8N104 65 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 ATP2A3Q93084 1043 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 PLD4Q96BZ4 506 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 SERPINB11Q96P15 392 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 EBF3Q9H4W6 596 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 EPHX3Q9H6B9 360 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.09■■□□□ 1.136e-8■■■■■ 48
R3HDM4-204ENST00000589428 CTAGE9A4FU28 777 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 MSI1O43347 362 aaKnown RBP22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 STC2O76061 302 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 SDC4P31431 198 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 TNK2Q07912 1038 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 C15orf59Q2T9L4 293 aaPredicted RBP22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 CPA6Q8N4T0 437 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 CD101Q93033 1021 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 DDX23Q9BUQ8 820 aaKnown RBP22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 ADAM33Q9BZ11 813 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 DCLK3Q9C098 648 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 HEBP1Q9NRV9 189 aa22.09■■□□□ 1.13
R3HDM4-204ENST00000589428 TICRRQ7Z2Z1 1910 aa22.08■■□□□ 1.13
R3HDM4-204ENST00000589428 SPOPO43791 374 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 NFATC1O95644 943 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 TFE3P19532 575 aaPredicted RBP22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 SLC1A1P43005 524 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 PTPN9P43378 593 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 RUNX3Q13761 415 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 MLF2Q15773 248 aaPredicted RBP22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 EML3Q32P44 896 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 ITPRIPL2Q3MIP1 535 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 SLC44A4Q53GD3 710 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 SH3PXD2AQ5TCZ1 1133 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 SYPL2Q5VXT5 272 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 HTR3DQ70Z44 454 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 SIX5Q8N196 739 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 ARFGAP1Q8N6T3 406 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 WBP2Q969T9 261 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 OTUB2Q96DC9 234 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 GTSE1Q9NYZ3 720 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 AMFRQ9UKV5 643 aa22.08■■□□□ 1.12
R3HDM4-204ENST00000589428 ARSAP15289 507 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 TCF4P15884 667 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 ATP11AP98196 1134 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 TRIP4Q15650 581 aaPredicted RBP22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 RAB6CQ53S08 254 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 OTUD1Q5VV17 481 aaPredicted RBP22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 TAC4Q86UU9 113 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 BBS7Q8IWZ6 715 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 KIF18AQ8NI77 898 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 NT5C3BQ969T7 300 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 HES6Q96HZ4 224 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 SHDQ96IW2 340 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 RAB6CQ9H0N0 254 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 FAM204AQ9H8W3 233 aa22.07■■□□□ 1.12
R3HDM4-204ENST00000589428 HPS4Q9NQG7 708 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms