RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 SERPINB9P50453 376 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 CELF3Q5SZQ8 465 aaKnown RBP13.85□□□□□ -0.19
KDM4B-208ENST00000589104 DNAJC14Q6Y2X3 702 aaPredicted RBP13.85□□□□□ -0.19
KDM4B-208ENST00000589104 NME8Q8N427 588 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 STKLD1Q8NE28 680 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 C1QTNF1Q9BXJ1 281 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 TRIM64A6NGJ6 449 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 TRIM49D1C9J1S8 452 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 BTBD19C9JJ37 291 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 CYB561D2O14569 222 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 B4GALT5O43286 388 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 RNASEH1O60930 286 aaKnown RBP13.85□□□□□ -0.19
KDM4B-208ENST00000589104 DNAJB1P25685 340 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 MTTPP55157 894 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 TBL3Q12788 808 aaKnown RBP13.85□□□□□ -0.19
KDM4B-208ENST00000589104 PDE1CQ14123 709 aaPredicted RBP13.85□□□□□ -0.19
KDM4B-208ENST00000589104 EPGNQ6UW88 154 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 SCUBE1Q8IWY4 988 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 E2F7Q96AV8 911 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 PLEKHG4BQ96PX9 1271 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 R3HDMLQ9H3Y0 253 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 OCEL1Q9H607 264 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 AS3MTQ9HBK9 375 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 PCMTD2Q9NV79 361 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 PDP2Q9P2J9 529 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 ADAMTS6Q9UKP5 1117 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 BARX2Q9UMQ3 279 aaPredicted RBP13.85□□□□□ -0.19
KDM4B-208ENST00000589104 NEU3Q9UQ49 428 aa13.85□□□□□ -0.19
KDM4B-208ENST00000589104 COL1A2P08123 1366 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 MCF2LO15068 1137 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 ZSCAN9O15535 394 aaPredicted RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 RBL1P28749 1068 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 EIF4EBP2Q13542 120 aaPredicted RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 ACBD5Q5T8D3 534 aaPredicted RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 NRDE2Q9H7Z3 1164 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 ZWILCHQ9H900 591 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 HACL1Q9UJ83 578 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 GYG2O15488 501 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 ATP9BO43861 1147 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 IDH3AP50213 366 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 CDK7P50613 346 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 TFDP2Q14188 446 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 BOLA3Q53S33 107 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 RAPH1Q70E73 1250 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 TFB1MQ8WVM0 346 aaKnown RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 WWP1Q9H0M0 922 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 IL1RAPL1Q9NZN1 696 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 HACD1B0YJ81 288 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 PRR5-ARHGAP8B1AHC4 643 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 TPD52L2O43399 206 aaKnown RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 ACAT1P24752 427 aaKnown RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 TCF7P36402 384 aaPredicted RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 SESN3P58005 492 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 ARHGAP8P85298 464 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 APOFQ13790 326 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 ATF7IP2Q5U623 682 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 JADE1Q6IE81 842 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 DCUN1D2Q6PH85 259 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 KLF6Q99612 283 aaPredicted RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 DNAAF2Q9NVR5 837 aaKnown RBP13.84□□□□□ -0.19
KDM4B-208ENST00000589104 DCTN4Q9UJW0 460 aa13.84□□□□□ -0.19
KDM4B-208ENST00000589104 FRMPD3Q5JV73 1810 aa13.83□□□□□ -0.19
KDM4B-208ENST00000589104 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 LACTBL1A8MY62 500 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 STAT5BP51692 787 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 LMNTD2Q8IXW0 634 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 MARVELD2Q8N4S9 558 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 RXFP2Q8WXD0 754 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 RSAD2Q8WXG1 361 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 SNRNP25Q9BV90 132 aaKnown RBP13.83□□□□□ -0.2
KDM4B-208ENST00000589104 SARDHQ9UL12 918 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 PCDHGA4Q9Y5G9 962 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 GOLGA8RI6L899 631 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 PAPSS1O43252 624 aaPredicted RBP13.83□□□□□ -0.2
KDM4B-208ENST00000589104 DPEP1P16444 411 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 TFE3P19532 575 aaPredicted RBP13.83□□□□□ -0.2
KDM4B-208ENST00000589104 ITGAXP20702 1163 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 OSBPP22059 807 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 DPYSQ14117 519 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 TSNAXIP1Q2TAA8 658 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 ATG16L1Q676U5 607 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 FBXL19Q6PCT2 694 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 SLC26A9Q7LBE3 791 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 TTC39CQ8N584 583 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 MAELQ96JY0 434 aaKnown RBP13.83□□□□□ -0.2
KDM4B-208ENST00000589104 ARMCX1Q9P291 453 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 A0A0G2JND7 137 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 TRIM64CA6NLI5 447 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 CREB3O43889 395 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 PAFAH1B3Q15102 231 aaKnown RBP13.83□□□□□ -0.2
KDM4B-208ENST00000589104 KCTD6Q8NC69 237 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 SMC1BQ8NDV3 1235 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 CCDC110Q8TBZ0 833 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 SEPT1Q8WYJ6 367 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 TUBGCP5Q96RT8 1024 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 SPATA16Q9BXB7 569 aa13.83□□□□□ -0.2
KDM4B-208ENST00000589104 NRBP2Q9NSY0 501 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms