RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 SLC39A13Q96H72 371 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 CALR3Q96L12 384 aaKnown RBP8.51□□□□□ -1.05
APOC1-202ENST00000588750 LRRC3BQ96PB8 259 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 PANX2Q96RD6 677 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 PNKPQ96T60 521 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 NPY6RQ99463 290 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 SYT11Q9BT88 431 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 BBS2Q9BXC9 721 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 ISCUQ9H1K1 167 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 KCNH6Q9H252 994 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 EPHX3Q9H6B9 360 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 RETREG1Q9H6L5 497 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 LTB4R2Q9NPC1 389 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 HPS4Q9NQG7 708 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 DONSONQ9NYP3 566 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 DEC1Q9P2X7 70 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 TMEM59LQ9UK28 342 aa8.51□□□□□ -1.05
APOC1-202ENST00000588750 KIF26AQ9ULI4 1882 aaPredicted RBP8.51□□□□□ -1.05
APOC1-202ENST00000588750 TICRRQ7Z2Z1 1910 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 KRBA1A5PL33 1030 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 FAM170BA6NMN3 283 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 KCNU1A8MYU2 1149 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 EIF3CLB5ME19 914 aaKnown RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 NEDD8-MDP1E9PL57 170 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 DDX3XO00571 662 aaKnown RBP eCLIP8.5□□□□□ -1.051e-7■■■■■ 82.7
APOC1-202ENST00000588750 NPC1O15118 1278 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 MSI1O43347 362 aaKnown RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 TIMM44O43615 452 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 CACNG3O60359 315 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 ADCY5O95622 1261 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 CYP17A1P05093 508 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 H2AFZP0C0S5 128 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 ARSAP15289 507 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 RRM1P23921 792 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 EIF4A3P38919 411 aaKnown RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 CXCR3P49682 368 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 ZNF143P52747 638 aaPredicted RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 ZXDBP98169 803 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 TNK2Q07912 1038 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 PTP4A2Q12974 167 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 TBX2Q13207 712 aaPredicted RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 PIGHQ14442 188 aaPredicted RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 HSF5Q4G112 596 aaPredicted RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 LY6G5CQ5SRR4 150 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 SYPL2Q5VXT5 272 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 GRAMD4Q6IC98 578 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 RHBDF2Q6PJF5 856 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 TPGS1Q6ZTW0 290 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 H2AFVQ71UI9 128 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 TMTC1Q8IUR5 882 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 HJURPQ8NCD3 748 aaPredicted RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 PJA1Q8NG27 643 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 UCMAQ8WVF2 138 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 NT5C3BQ969T7 300 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 TMA16Q96EY4 203 aaKnown RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 FCRL2Q96LA5 508 aaPredicted RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 C1orf74Q96LT6 269 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 EIF3CQ99613 913 aaKnown RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 LINC00597Q9H2U6 94 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 NHEJ1Q9H9Q4 299 aaPredicted RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 ARHGAP20Q9P2F6 1191 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 UVRAGQ9P2Y5 699 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 CNOT8Q9UFF9 292 aaKnown RBP8.5□□□□□ -1.05
APOC1-202ENST00000588750 INTUQ9ULD6 942 aa8.5□□□□□ -1.05
APOC1-202ENST00000588750 UNC80Q8N2C7 3258 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 SYNJ2BP-COX16A0A087WUM0 186 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 A0A087X0T9 212 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 C2CD4BA6NLJ0 364 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 MYO1FO00160 1098 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 ZBTB24O43167 697 aaPredicted RBP8.49□□□□□ -1.05
APOC1-202ENST00000588750 GREM1O60565 184 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 ENDOD1O94919 500 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 MOCS3O95396 460 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 MOCS2O96007 188 aaPredicted RBP8.49□□□□□ -1.05
APOC1-202ENST00000588750 KLKB1P03952 638 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 FAM228BP0C875 321 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 TYRP14679 529 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 FLT3P36888 993 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 GRIA2P42262 883 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 TNFRSF4P43489 277 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 DGKGP49619 791 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 ZNF135P52742 658 aaPredicted RBP8.49□□□□□ -1.05
APOC1-202ENST00000588750 MAMLD1Q13495 774 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 EIF4HQ15056 248 aaKnown RBP8.49□□□□□ -1.05
APOC1-202ENST00000588750 TAF5Q15542 800 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 C2CD6Q53TS8 623 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 ZC3H12AQ5D1E8 599 aaKnown RBP8.49□□□□□ -1.05
APOC1-202ENST00000588750 TMEM196Q5HYL7 178 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 PLEKHA7Q6IQ23 1121 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 SDE2Q6IQ49 451 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 WDR59Q6PJI9 974 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 CHSY1Q86X52 802 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 RHOT2Q8IXI1 618 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 RXFP2Q8WXD0 754 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 KHSRPQ92945 711 aaKnown RBP eCLIP8.49□□□□□ -1.05
APOC1-202ENST00000588750 ACDQ96AP0 544 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 CFAP57Q96MR6 1250 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 MCEEQ96PE7 176 aa8.49□□□□□ -1.05
APOC1-202ENST00000588750 HAPLN3Q96S86 360 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms