RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ANKRD52Q8NB46 1076 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 CYB5D2Q8WUJ1 264 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 ERCC4Q92889 916 aaPredicted RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 GATA6Q92908 595 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 ZNF419Q96HQ0 510 aaPredicted RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 PIWIL1Q96J94 861 aaKnown RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 OLA1Q9NTK5 396 aaKnown RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 RMND1Q9NWS8 449 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 ELOVL2Q9NXB9 296 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 FBXO10Q9UK96 956 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 ZFHX4Q86UP3 3567 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 CD59P13987 128 aa14.32□□□□□ -0.12
HDAC5-208ENST00000588419 RGS7P49802 495 aa14.32□□□□□ -0.12
HDAC5-208ENST00000588419 TPMTP51580 245 aa14.32□□□□□ -0.12
HDAC5-208ENST00000588419 YWHAEP62258 255 aaKnown RBP14.32□□□□□ -0.12
HDAC5-208ENST00000588419 MPPE1Q53F39 396 aa14.32□□□□□ -0.12
HDAC5-208ENST00000588419 NAXDQ8IW45 347 aa14.32□□□□□ -0.12
HDAC5-208ENST00000588419 CPXM2Q8N436 756 aa14.32□□□□□ -0.12
HDAC5-208ENST00000588419 ZNF276Q8N554 614 aa14.32□□□□□ -0.12
HDAC5-208ENST00000588419 TMEM121BQ9BXQ6 578 aaPredicted RBP14.32□□□□□ -0.12
HDAC5-208ENST00000588419 DNAAF2Q9NVR5 837 aaKnown RBP14.32□□□□□ -0.12
HDAC5-208ENST00000588419 WSB2Q9NYS7 404 aaPredicted RBP14.32□□□□□ -0.12
HDAC5-208ENST00000588419 USP36Q9P275 1121 aaKnown RBP14.32□□□□□ -0.12
HDAC5-208ENST00000588419 NEUROG3Q9Y4Z2 214 aa14.32□□□□□ -0.12
HDAC5-208ENST00000588419 PLXNB3Q9ULL4 1909 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 CFAP47Q6ZTR5 3102 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 A0A1B0GTW7 788 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 TMEM8BA6NDV4 472 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 GOLGA6L4A6NEF3 574 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 YJEFN3A6XGL0 299 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 E7ENQ6 273 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 NPC1O15118 1278 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 SLC16A3O15427 465 aaKnown RBP14.31□□□□□ -0.12
HDAC5-208ENST00000588419 HOXD9P28356 352 aaPredicted RBP14.31□□□□□ -0.12
HDAC5-208ENST00000588419 COPAP53621 1224 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 PMS1P54277 932 aaKnown RBP14.31□□□□□ -0.12
HDAC5-208ENST00000588419 EIF4HQ15056 248 aaKnown RBP14.31□□□□□ -0.12
HDAC5-208ENST00000588419 TMEM215Q68D42 235 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 CHST9Q7L1S5 443 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 BHLHA9Q7RTU4 235 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 PNPLA1Q8N8W4 532 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 SETD7Q8WTS6 366 aaKnown RBP14.31□□□□□ -0.12
HDAC5-208ENST00000588419 UBXN6Q9BZV1 441 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 ITM2CQ9NQX7 267 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 ABCB8Q9NUT2 735 aa14.31□□□□□ -0.12
HDAC5-208ENST00000588419 EIF2B4Q9UI10 523 aaKnown RBP14.31□□□□□ -0.12
HDAC5-208ENST00000588419 IGF2RP11717 2491 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 UPK3BL1B0FP48 263 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 UPK3BL2E5RIL1 263 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 M0QYV0 167 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 OXTRP30559 389 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 SGSHP51688 502 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 E2F5Q15329 346 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 TRIP4Q15650 581 aaPredicted RBP14.3□□□□□ -0.12
HDAC5-208ENST00000588419 TRIP6Q15654 476 aaKnown RBP14.3□□□□□ -0.12
HDAC5-208ENST00000588419 ZNF658Q5TYW1 1059 aaPredicted RBP14.3□□□□□ -0.12
HDAC5-208ENST00000588419 BSPRYQ5W0U4 402 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 ANKRD40Q6AI12 368 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 ISM2Q6H9L7 571 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 TMEM270Q6UE05 265 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 KDF1Q8NAX2 398 aaPredicted RBP14.3□□□□□ -0.12
HDAC5-208ENST00000588419 FAXDC2Q96IV6 333 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 LHX5Q9H2C1 402 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 IL21RQ9HBE5 538 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 ARMCX3Q9UH62 379 aaPredicted RBP14.3□□□□□ -0.12
HDAC5-208ENST00000588419 GGA2Q9UJY4 613 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 MSRB2Q9Y3D2 182 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 HBS1LQ9Y450 684 aaKnown RBP14.3□□□□□ -0.12
HDAC5-208ENST00000588419 PCDHB4Q9Y5E5 795 aa14.3□□□□□ -0.12
HDAC5-208ENST00000588419 CEP295Q9C0D2 2601 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 GOLGA8CPA6NN73 597 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 SRRM3A6NNA2 597 aaPredicted RBP14.29□□□□□ -0.12
HDAC5-208ENST00000588419 H0Y626 953 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 BCAT2O15382 392 aaPredicted RBP14.29□□□□□ -0.12
HDAC5-208ENST00000588419 TBL1XO60907 577 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 TRIM16O95361 564 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 CALCAP01258 141 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 FTH1P19P0C7X4 201 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 SETSIPP0DME0 302 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 VDRP11473 427 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 TBXAS1P24557 533 aaPredicted RBP14.29□□□□□ -0.12
HDAC5-208ENST00000588419 BRD2P25440 801 aaKnown RBP14.29□□□□□ -0.12
HDAC5-208ENST00000588419 HLA-FP30511 346 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 MATKP42679 507 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 ZNF132P52740 706 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 FKBP3Q00688 224 aaKnown RBP14.29□□□□□ -0.12
HDAC5-208ENST00000588419 ENPP2Q13822 863 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 ZNF423Q2M1K9 1284 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 CCDC40Q4G0X9 1142 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 PM20D1Q6GTS8 502 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 RFWD3Q6PCD5 774 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 FAM217AQ8IXS0 508 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 OR2T3Q8NH03 318 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 WFIKKN2Q8TEU8 576 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 SMARCE1Q969G3 411 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 TMA16Q96EY4 203 aaKnown RBP14.29□□□□□ -0.12
HDAC5-208ENST00000588419 NUP58Q9BVL2 599 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 SLC2A11Q9BYW1 496 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 GAREM1Q9H706 876 aa14.29□□□□□ -0.12
HDAC5-208ENST00000588419 ABCC13Q9NSE7 274 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms