RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 FAM20BO75063 409 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 GUCY1B2O75343 617 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 F9P00740 461 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 RHOP08100 348 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 IL6RP08887 468 aaPredicted RBP6.04□□□□□ -1.44
TUBD1-208ENST00000588009 ACP5P13686 325 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 TNNT1P13805 278 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 ADRA1DP25100 572 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 GGT5P36269 586 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 PAFAH1B1P43034 410 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 CLCN2P51788 898 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 DRG2P55039 364 aaKnown RBP6.04□□□□□ -1.44
TUBD1-208ENST00000588009 FOXL2P58012 376 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 TLE3Q04726 772 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 DEUP1Q05D60 604 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 TBL3Q12788 808 aaKnown RBP6.04□□□□□ -1.44
TUBD1-208ENST00000588009 DNASE1L3Q13609 305 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 CBFBQ13951 182 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 CAMK1Q14012 370 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 SF3B3Q15393 1217 aaKnown RBP6.04□□□□□ -1.44
TUBD1-208ENST00000588009 MEA1Q16626 185 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 FAM187BQ17R55 369 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 FAM69AQ5T7M9 428 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 TEDDM1Q5T9Z0 273 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 ZNF280DQ6N043 979 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 VWA1Q6PCB0 445 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 DPY19L3Q6ZPD9 716 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 MYCBPAPQ8TBZ2 947 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 XAGE5Q8WWM1 108 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 MASTLQ96GX5 879 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 PRR11Q96HE9 360 aaPredicted RBP6.04□□□□□ -1.44
TUBD1-208ENST00000588009 WWC2-AS2Q96NR7 200 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 PDCL3Q9H2J4 239 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 STN1Q9H668 368 aaKnown RBP6.04□□□□□ -1.44
TUBD1-208ENST00000588009 SAP30LQ9HAJ7 183 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 PDE11AQ9HCR9 933 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 KRT84Q9NSB2 600 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 GPR34Q9UPC5 381 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 NAALADL1Q9UQQ1 740 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 PCDHB2Q9Y5E7 798 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 CUX2O14529 1486 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 OTOL1A6NHN0 477 aaPredicted RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 PRICKLE3O43900 615 aaPredicted RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 TULP3O75386 442 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 TIPRLO75663 272 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 ONECUT2O95948 504 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 ZNF37AP17032 561 aaPredicted RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 ZFP36P26651 326 aaKnown RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 IGHMBP2P38935 993 aaKnown RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 THOC5Q13769 683 aaKnown RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 ICAM4Q14773 271 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 SEC23BQ15437 767 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 CYP1B1Q16678 543 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 PRICKLE4Q2TBC4 344 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 ZNF618Q5T7W0 954 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 B4GALNT4Q76KP1 1039 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 C1QL4Q86Z23 238 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 NGEFQ8N5V2 710 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 LSM14AQ8ND56 463 aaKnown RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 TOR1AIP2Q8NFQ8 470 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 SSH3Q8TE77 659 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 CLEC4CQ8WTT0 213 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 PTCD3Q96EY7 689 aaKnown RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 TRMT61AQ96FX7 289 aaKnown RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 PRR25Q96S07 402 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 ADOQ96SZ5 270 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 NPAS1Q99742 590 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 NUDT16L1Q9BRJ7 211 aaKnown RBP6.03□□□□□ -1.44
TUBD1-208ENST00000588009 XYLT2Q9H1B5 865 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 NSMCE4AQ9NXX6 385 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 MGAT4CQ9UBM8 478 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 GABRQQ9UN88 632 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 SH2B3Q9UQQ2 575 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 TTLL3Q9Y4R7 772 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 ENTPD2Q9Y5L3 495 aa6.03□□□□□ -1.44
TUBD1-208ENST00000588009 CECR2Q9BXF3 1484 aa6.02□□□□□ -1.44
TUBD1-208ENST00000588009 ADGRA2Q96PE1 1338 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 SH2D7A6NKC9 451 aaPredicted RBP6.02□□□□□ -1.45
TUBD1-208ENST00000588009 H3BNC9 293 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 PROM1O43490 865 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 TMCC2O75069 709 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 SPDEFO95238 335 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 WEE2P0C1S8 567 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 PRKCHP24723 683 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 ACRV1P26436 265 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 STAT1P42224 750 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 RAD52P43351 418 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 TAS2R50P59544 299 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 SETQ01105 290 aaPredicted RBP6.02□□□□□ -1.45
TUBD1-208ENST00000588009 TDGQ13569 410 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 CCNG2Q16589 344 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 WDR93Q6P2C0 686 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 KIAA1324Q6UXG2 1013 aaKnown RBP6.02□□□□□ -1.45
TUBD1-208ENST00000588009 LCNL1Q6ZST4 164 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 OR8H2Q8N162 312 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 LNX2Q8N448 690 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 OR52L2PQ8NGH6 319 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 ZCCHC10Q8TBK6 192 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 GLMPQ8WWB7 406 aa6.02□□□□□ -1.45
TUBD1-208ENST00000588009 PGBD1Q96JS3 809 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms