RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SMYD5Q6GMV2 418 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 ERMP1Q7Z2K6 904 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 PASD1Q8IV76 773 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 C12orf50Q8NA57 414 aaPredicted RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 ENOX1Q8TC92 643 aaKnown RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 IPO4Q8TEX9 1081 aaKnown RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 GABRG3Q99928 467 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 TRIM62Q9BVG3 475 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 PCDHGC3Q9UN70 934 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 RAD54BQ9Y620 910 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 RALGAPA1Q6GYQ0 2036 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 GOLGA6L7A0A1B0GV03 622 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 WASH3PC4AMC7 463 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 MAP3K13O43283 966 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 ACSL4O60488 711 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 PNMA6AP0CW24 399 aaPredicted RBP18.41■□□□□ 0.54
TPM4-206ENST00000587201 KRT9P35527 623 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 ATXN1P54253 815 aaKnown RBP18.41■□□□□ 0.54
TPM4-206ENST00000587201 KCNMA1Q12791 1236 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 RAPGEF1Q13905 1077 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 SF3A2Q15428 464 aaKnown RBP18.41■□□□□ 0.54
TPM4-206ENST00000587201 KIAA1211LQ6NV74 962 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 SASS6Q6UVJ0 657 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 RBM43Q6ZSC3 357 aaKnown RBP18.41■□□□□ 0.54
TPM4-206ENST00000587201 BEND5Q7L4P6 421 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 WDTC1Q8N5D0 677 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 FRMD1Q8N878 549 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 ADAM32Q8TC27 787 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 NETO1Q8TDF5 533 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 CIPCQ9C0C6 399 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 SMOC1Q9H4F8 434 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 POPDC2Q9HBU9 364 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 VPS45Q9NRW7 570 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 ELOVL2Q9NXB9 296 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 TAB2Q9NYJ8 693 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 TJP2Q9UDY2 1190 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 TLR6Q9Y2C9 796 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 STON1Q9Y6Q2 735 aa18.41■□□□□ 0.54
TPM4-206ENST00000587201 DNAH14Q0VDD8 3507 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 NPC1O15118 1278 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 GDF9O60383 454 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 CLCN1P35523 988 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 DHPSP49366 369 aaPredicted RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 YWHAZP63104 245 aaKnown RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 ARID5AQ03989 594 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 NNTQ13423 1086 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 DRAP1Q14919 205 aaPredicted RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 EIF4HQ15056 248 aaKnown RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 E2F5Q15329 346 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 MAP7D1Q3KQU3 841 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 PLA2G2CQ5R387 149 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 SYPL2Q5VXT5 272 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 RFWD3Q6PCD5 774 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 TAC4Q86UU9 113 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 SLC47A2Q86VL8 602 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 C1orf131Q8NDD1 294 aaKnown RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 AZIN2Q96A70 460 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 PPP1R13BQ96KQ4 1090 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 FCRL2Q96LA5 508 aaPredicted RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 NOX5Q96PH1 765 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 CPXM1Q96SM3 734 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 DDX50Q9BQ39 737 aaKnown RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 LSM14BQ9BX40 385 aaKnown RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 CALCOCO1Q9P1Z2 691 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 THAP10Q9P2Z0 257 aaPredicted RBP18.4■□□□□ 0.54
TPM4-206ENST00000587201 FHOD1Q9Y613 1164 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 CEP250Q9BV73 2442 aa18.4■□□□□ 0.54
TPM4-206ENST00000587201 BCLAF3A2AJT9 711 aaKnown RBP18.39■□□□□ 0.53
TPM4-206ENST00000587201 IRAK2O43187 625 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 TBL1XO60907 577 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 CAVIN2O95810 425 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 MOCS2O96007 188 aaPredicted RBP18.39■□□□□ 0.53
TPM4-206ENST00000587201 NDUFV2P19404 249 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 SLC6A4P31645 630 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 IL12RB1P42701 662 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 SGSHP51688 502 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 BPIFB4P59827 614 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 FOXK2Q01167 660 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 STARD3Q14849 445 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 FAM133BQ5BKY9 247 aaKnown RBP18.39■□□□□ 0.53
TPM4-206ENST00000587201 PIK3R6Q5UE93 754 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 KLHDC7AQ5VTJ3 777 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 DPY19L2P1Q6NXN4 242 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 LPCAT2Q7L5N7 544 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 FAM71AQ8IYT1 594 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 RTKNQ9BST9 563 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 IRX2Q9BZI1 471 aaPredicted RBP18.39■□□□□ 0.53
TPM4-206ENST00000587201 VPS16Q9H269 839 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 LHX5Q9H2C1 402 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 PDCL3Q9H2J4 239 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 CD248Q9HCU0 757 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 MBD1Q9UIS9 605 aaPredicted RBP18.39■□□□□ 0.53
TPM4-206ENST00000587201 CEP83Q9Y592 693 aa18.39■□□□□ 0.53
TPM4-206ENST00000587201 DCHS1Q96JQ0 3298 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 TYW5A2RUC4 315 aaKnown RBP18.38■□□□□ 0.53
TPM4-206ENST00000587201 TIMM44O43615 452 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 TRUB2O95900 331 aaKnown RBP18.38■□□□□ 0.53
TPM4-206ENST00000587201 TPM2P07951 284 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms