RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TUBP50607 506 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 VCPP55072 806 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 TBX4P57082 545 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 EIF3EP60228 445 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 COG7P83436 770 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 SLC7A5Q01650 507 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 OTUD4Q01804 1114 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 SCAPQ12770 1279 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 EFEMP1Q12805 493 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TAF10Q12962 218 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 KLF1Q13351 362 aaPredicted RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 PTK6Q13882 451 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 RAB33AQ14088 237 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 PPP2R5DQ14738 602 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 ARHGAP15Q53QZ3 475 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 HSP90B2PQ58FF3 399 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 PPM1LQ5SGD2 360 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 HECTD3Q5T447 861 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 SDHAF4Q5VUM1 108 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 SYPL2Q5VXT5 272 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 PLPP4Q5VZY2 271 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 HEATR6Q6AI08 1181 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 TRNP1Q6NT89 227 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 MSANTD2Q6P1R3 559 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 DRICH1Q6PGQ1 229 aaPredicted RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 DARS2Q6PI48 645 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 PPP1R21Q6ZMI0 780 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 HFE2Q6ZVN8 426 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 RTL10Q7L3V2 364 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 HDXQ7Z353 690 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TAC4Q86UU9 113 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 CPNE8Q86YQ8 564 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 CCDC117Q8IWD4 279 aaPredicted RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 TCEAL8Q8IYN2 117 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 CCDC185Q8N715 623 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 KLHL23Q8NBE8 558 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 LRRN4CLQ8ND94 238 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 CMASQ8NFW8 434 aaPredicted RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 SCAMP5Q8TAC9 235 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 ADAM32Q8TC27 787 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 DQX1Q8TE96 717 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 GIPC2Q8TF65 315 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 HNRNPLLQ8WVV9 542 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 C1orf54Q8WWF1 131 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 ANKRD7Q92527 254 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 RAPGEF5Q92565 580 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 MRPS31Q92665 395 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 SLCO2A1Q92959 643 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 NT5C3BQ969T7 300 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 PLD4Q96BZ4 506 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TBC1D31Q96DN5 1066 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TRMT2BQ96GJ1 504 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 ABHD8Q96I13 439 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 PKNOX2Q96KN3 472 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 RNF157Q96PX1 679 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TGS1Q96RS0 853 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 PEBP4Q96S96 227 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 FMO2Q99518 471 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 DDX50Q9BQ39 737 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 CLSTN3Q9BQT9 956 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TTLL2Q9BWV7 592 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TRIM31Q9BZY9 425 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 UBE2OQ9C0C9 1292 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 TKTL2Q9H0I9 626 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 DPH5Q9H2P9 285 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 PCDH18Q9HCL0 1135 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 PIGVQ9NUD9 493 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 GOLGA6AQ9NYA3 693 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 MARCH2Q9P0N8 246 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 GMIPQ9P107 970 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 LSM7Q9UK45 103 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 RAB21Q9UL25 225 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 PCDHA11Q9Y5I1 949 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 HEY1Q9Y5J3 304 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 INSL5Q9Y5Q6 135 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 SLC12A8A0AV02 714 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 FAM92AA1XBS5 289 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 LINC01553A4QN01 128 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 GOLGA6L10A6NI86 522 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 HACD1B0YJ81 288 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 F5H5T6 163 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 TEX28O15482 410 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 MTSS1O43312 755 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 LIASO43766 372 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 TBC1D4O60343 1298 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 TLR5O60602 858 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 SOAT2O75908 522 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 ABLIM3O94929 683 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 CSPG5O95196 566 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 CXCL14O95715 111 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 IFNB1P01574 187 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 KRT14P02533 472 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 C8AP07357 584 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 RBP3P10745 1247 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 GOT1P17174 413 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 ATF6P18850 670 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 EPHB2P29323 1055 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 STIP1P31948 543 aaKnown RBP6.4□□□□□ -1.38
LIG3-206ENST00000586058 L1CAMP32004 1257 aa6.4□□□□□ -1.38
LIG3-206ENST00000586058 ADRA1BP35368 520 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms