RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 ZNF423Q2M1K9 1284 aa21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 TCERG1LQ5VWI1 586 aa21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 ARHGAP17Q68EM7 881 aa21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 PM20D1Q6GTS8 502 aa21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 SERPINA13PQ6UXR4 307 aa21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 RAB44Q7Z6P3 723 aaPredicted RBP21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 NAXDQ8IW45 347 aa21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 LRRC4Q9HBW1 653 aa21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 GDPD2Q9HCC8 539 aa21.03■□□□□ 0.96
CLPTM1-204ENST00000585961 FAM237AA0A1B0GTK4 181 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 PIK3R2O00459 728 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 NPC1O15118 1278 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 CETN3O15182 167 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 BCAT2O15382 392 aaPredicted RBP21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 TIMM44O43615 452 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 EPB41P11171 864 aaKnown RBP21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 CD19P15391 556 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 OXTRP30559 389 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 HARS2P49590 506 aaKnown RBP21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 RING1Q06587 406 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 ENPEPQ07075 957 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 TRIP4Q15650 581 aaPredicted RBP21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 CBWD6Q4V339 395 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 ZCWPW2Q504Y3 356 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 DCAF17Q5H9S7 520 aaPredicted RBP21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 CBWD3Q5JTY5 395 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 CBWD5Q5RIA9 395 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 BHLHA9Q7RTU4 235 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 SLCO6A1Q86UG4 719 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 CPXM2Q8N436 756 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 RBBP8NLQ8NC74 664 aaPredicted RBP21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 CADM4Q8NFZ8 388 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 RNF139Q8WU17 664 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 SNX19Q92543 992 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 TMA16Q96EY4 203 aaKnown RBP21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 GAREM1Q9H706 876 aa21.02■□□□□ 0.96
CLPTM1-204ENST00000585961 KCNK3O14649 394 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 LCP1P13796 627 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 ZNF132P52740 706 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 BNC1Q01954 994 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 HNRNPDQ14103 355 aaKnown RBP21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 FNDC3BQ53EP0 1204 aaKnown RBP21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 MPPE1Q53F39 396 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 BSPRYQ5W0U4 402 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 IPO9Q96P70 1041 aaKnown RBP21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 SLC2A11Q9BYW1 496 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 TSPAN16Q9UKR8 245 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 SLCO1B1Q9Y6L6 691 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 PCDH15Q96QU1 1955 aa21.01■□□□□ 0.95
CLPTM1-204ENST00000585961 GOLGA6L7A0A1B0GV03 622 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 A0A1B0GVT2 93 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 GOLGA8CPA6NN73 597 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 YJEFN3A6XGL0 299 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 E7ENQ6 273 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 STX10O60499 249 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 FTH1P19P0C7X4 201 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 PRCPP42785 496 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 CSNK1EP49674 416 aaKnown RBP21■□□□□ 0.95
CLPTM1-204ENST00000585961 ADIGQ0VDE8 80 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 SCAPQ12770 1279 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 PNOCQ13519 176 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 HLA-BQ31612 363 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 EDRF1Q3B7T1 1238 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 CHST9Q7L1S5 443 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 TTC39CQ8N584 583 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 PLD4Q96BZ4 506 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 ZDHHC5Q9C0B5 715 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 C6orf106Q9H6K1 298 aaPredicted RBP21■□□□□ 0.95
CLPTM1-204ENST00000585961 ABCB8Q9NUT2 735 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 PLA2G4CQ9UP65 541 aa21■□□□□ 0.95
CLPTM1-204ENST00000585961 FAM221BA6H8Z2 402 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 XPO1O14980 1071 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 MSI1O43347 362 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 CALCAP01258 141 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 HOXD9P28356 352 aaPredicted RBP20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 HLA-FP30511 346 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 ACSL1P33121 698 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 RGS7P49802 495 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 SGSHP51688 502 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 MCCD1P59942 119 aaPredicted RBP20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 COL9A2Q14055 689 aaPredicted RBP20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 SGO2Q562F6 1265 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 ANKRD40Q6AI12 368 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 C19orf48Q6RUI8 117 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 LRSAM1Q6UWE0 723 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 FAM217AQ8IXS0 508 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 OR2T3Q8NH03 318 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 FAXDC2Q96IV6 333 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 HESX1Q9UBX0 185 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 LHX6Q9UPM6 363 aa20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 FNDC3AQ9Y2H6 1198 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-204ENST00000585961 MATKP42679 507 aa20.98■□□□□ 0.95
CLPTM1-204ENST00000585961 CUL2Q13617 745 aa20.98■□□□□ 0.95
CLPTM1-204ENST00000585961 RFWD3Q6PCD5 774 aa20.98■□□□□ 0.95
CLPTM1-204ENST00000585961 MARCH9Q86YJ5 346 aa20.98■□□□□ 0.95
CLPTM1-204ENST00000585961 ADAMTS14Q8WXS8 1223 aa20.98■□□□□ 0.95
CLPTM1-204ENST00000585961 ERCC4Q92889 916 aaPredicted RBP20.98■□□□□ 0.95
CLPTM1-204ENST00000585961 MTG2Q9H4K7 406 aa20.98■□□□□ 0.95
CLPTM1-204ENST00000585961 TM7SF3Q9NS93 570 aa20.98■□□□□ 0.95
CLPTM1-204ENST00000585961 OLA1Q9NTK5 396 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms