RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CC2D1AQ6P1N0 951 aaPredicted RBP13.14□□□□□ -0.31
VMP1-202ENST00000585847 TADA2BQ86TJ2 420 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 MMGT1Q8N4V1 131 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 ZNF276Q8N554 614 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 GPR161Q8N6U8 529 aaKnown RBP13.14□□□□□ -0.31
VMP1-202ENST00000585847 ARL14EPQ8N8R7 260 aaPredicted RBP13.14□□□□□ -0.31
VMP1-202ENST00000585847 SPATA4Q8NEY3 305 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 CENPIQ92674 756 aaPredicted RBP13.14□□□□□ -0.31
VMP1-202ENST00000585847 NT5C3BQ969T7 300 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 WBP2Q969T9 261 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 RSPRY1Q96DX4 576 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
VMP1-202ENST00000585847 CYP2S1Q96SQ9 504 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 TASP1Q9H6P5 420 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 TLR8Q9NR97 1041 aaKnown RBP13.14□□□□□ -0.31
VMP1-202ENST00000585847 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 C5orf42Q9H799 3197 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 TMEM110-MUSTN1A8MSY1 372 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 NDC80O14777 642 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 COCHO43405 550 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 CEP104O60308 925 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 LRCH4O75427 683 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 LTFP02788 710 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 LAMP2P13473 410 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 WEE1P30291 646 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 GBP1P32455 592 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 HTR7P34969 479 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 TUBP50607 506 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 PITX1P78337 314 aaPredicted RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 NNTQ13423 1086 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 FAM78AQ5JUQ0 283 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 OTUD1Q5VV17 481 aaPredicted RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 SYPL2Q5VXT5 272 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 RSRC2Q7L4I2 434 aaKnown RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 MAB21L3Q8N8X9 362 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 EIF1ADQ8N9N8 165 aaKnown RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 TTC13Q8NBP0 860 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 ST13P5Q8NFI4 369 aaPredicted RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 COG1Q8WTW3 980 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 RXFP2Q8WXD0 754 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.13□□□□□ -0.31
VMP1-202ENST00000585847 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 ALG3Q92685 438 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 ASB16Q96NS5 453 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 LRRC3BQ96PB8 259 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 SMG9Q9H0W8 520 aaKnown RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 OLA1Q9NTK5 396 aaKnown RBP13.13□□□□□ -0.31
VMP1-202ENST00000585847 EPS15L1Q9UBC2 864 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 USTQ9Y2C2 406 aa13.13□□□□□ -0.31
VMP1-202ENST00000585847 WDFY4Q6ZS81 3184 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 SOBPA7XYQ1 873 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 KRIT1O00522 736 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 CAPN9O14815 690 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 TLR5O60602 858 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 GRAP2O75791 330 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 ENDOD1O94919 500 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 TJP3O95049 919 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 FGGP02679 453 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 DDX6P26196 483 aaKnown RBP eCLIP13.12□□□□□ -0.31
VMP1-202ENST00000585847 CHRNA3P32297 505 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 RDXP35241 583 aaKnown RBP13.12□□□□□ -0.31
VMP1-202ENST00000585847 FNTAP49354 379 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 SLC25A11Q02978 314 aaKnown RBP13.12□□□□□ -0.31
VMP1-202ENST00000585847 LMNB2Q03252 620 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 ZNF252P-AS1Q0IIN9 211 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 EIF4EBP2Q13542 120 aaPredicted RBP13.12□□□□□ -0.31
VMP1-202ENST00000585847 ARL13BQ3SXY8 428 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 HECTD3Q5T447 861 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 MSANTD2Q6P1R3 559 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.313e-9■■■□□ 17.6
VMP1-202ENST00000585847 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 CMTM8Q8IZV2 173 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 C12orf50Q8NA57 414 aaPredicted RBP13.12□□□□□ -0.31
VMP1-202ENST00000585847 CCDC26Q8TAB7 109 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 JOSD2Q8TAC2 188 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 EDEM1Q92611 657 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 USP13Q92995 863 aaPredicted RBP13.12□□□□□ -0.31
VMP1-202ENST00000585847 NTAN1Q96AB6 310 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 FAM149B1Q96BN6 582 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 GCNAQ96QF7 691 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
VMP1-202ENST00000585847 PLA2G2FQ9BZM2 168 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 FAM129AQ9BZQ8 928 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 TRPV4Q9HBA0 871 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 TRPC7Q9HCX4 862 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 ABCC13Q9NSE7 274 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
VMP1-202ENST00000585847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.12□□□□□ -0.31
VMP1-202ENST00000585847 GDE1Q9NZC3 331 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 USP18Q9UMW8 372 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 NAALADL1Q9UQQ1 740 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 CCL26Q9Y258 94 aa13.12□□□□□ -0.31
VMP1-202ENST00000585847 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 ANHXE9PGG2 379 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms