RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 NRIP1P48552 1158 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 HCAR3P49019 387 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 SLC11A1P49279 550 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 EIF3BP55884 814 aaKnown RBP10.78□□□□□ -0.68
LIG3-203ENST00000585370 BCAR1P56945 870 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 EIF3EP60228 445 aaKnown RBP10.78□□□□□ -0.68
LIG3-203ENST00000585370 FAM193AP78312 1265 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 OTUD4Q01804 1114 aaKnown RBP10.78□□□□□ -0.68
LIG3-203ENST00000585370 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
LIG3-203ENST00000585370 SCAPQ12770 1279 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 GPR17Q13304 367 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 SLC39A12Q504Y0 691 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 SLC9A4Q6AI14 798 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 FUT10Q6P4F1 479 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 PDZD4Q76G19 769 aaPredicted RBP10.78□□□□□ -0.68
LIG3-203ENST00000585370 SPPL2BQ8TCT7 592 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 RSAD2Q8WXG1 361 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 FERMT1Q9BQL6 677 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 DHX35Q9H5Z1 703 aaKnown RBP10.78□□□□□ -0.68
LIG3-203ENST00000585370 PCDH9Q9HC56 1237 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 ABCC13Q9NSE7 274 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 TMLHEQ9NVH6 421 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 STK39Q9UEW8 545 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 MUTYHQ9UIF7 546 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 AP4E1Q9UPM8 1137 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 RAD54BQ9Y620 910 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 FNDC1Q4ZHG4 1894 aaPredicted RBP10.78□□□□□ -0.68
LIG3-203ENST00000585370 TECTAO75443 2155 aa10.77□□□□□ -0.68
LIG3-203ENST00000585370 YJEFN3A6XGL0 299 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 E7ENQ6 273 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 TNFRSF10BO14763 440 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 PER2O15055 1255 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 TBC1D4O60343 1298 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 RTN3O95197 1032 aaPredicted RBP10.77□□□□□ -0.69
LIG3-203ENST00000585370 GLP2RO95838 553 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 FYNP06241 537 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 CD48P09326 243 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 NCAM1P13591 858 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 IL4RP24394 825 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 HTR7P34969 479 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 ADRA1BP35368 520 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 ACTN2P35609 894 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 PMS2P54278 862 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 ERVFC1P60507 584 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 RPL10AP62906 217 aaKnown RBP10.77□□□□□ -0.69
LIG3-203ENST00000585370 ADCY2Q08462 1091 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 NOMO1Q15155 1222 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 CCDC142Q17RM4 750 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 USP41Q3LFD5 358 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 EFHC2Q5JST6 749 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 BSPRYQ5W0U4 402 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 ZDHHC24Q6UX98 284 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 TRMT10CQ7L0Y3 403 aaKnown RBP10.77□□□□□ -0.69
LIG3-203ENST00000585370 TMC3Q7Z5M5 1100 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 MON1AQ86VX9 555 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 RNF135Q8IUD6 432 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 NUP93Q8N1F7 819 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 PLD5Q8N7P1 536 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 SMRP1Q8NCR6 262 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 FBXO25Q8TCJ0 367 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 PPP2R3CQ969Q6 453 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 ACSF2Q96CM8 615 aaPredicted RBP10.77□□□□□ -0.69
LIG3-203ENST00000585370 GDAP1L1Q96MZ0 367 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 TTPALQ9BTX7 342 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 TXLNGYQ9BZA5 131 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 NEUROG2Q9H2A3 272 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 CWH43Q9H720 699 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 FBXW11Q9UKB1 542 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 TPX2Q9ULW0 747 aaKnown RBP10.77□□□□□ -0.69
LIG3-203ENST00000585370 SCML2Q9UQR0 700 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 PCDHB12Q9Y5F1 795 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 MYO15AQ9UKN7 3530 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 ZNF318Q5VUA4 2279 aa10.77□□□□□ -0.69
LIG3-203ENST00000585370 PLXNA4Q9HCM2 1894 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 DMDP11532 3685 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 BCLAF3A2AJT9 711 aaKnown RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 GOLGA6L10A6NI86 522 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 HACD1B0YJ81 288 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 SGK1O00141 431 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 DNALI1O14645 258 aaPredicted RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 FGF18O76093 207 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 RBP3P10745 1247 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 CYP2F1P24903 491 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 HSD17B3P37058 310 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 CXCR3P49682 368 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 PSEN1P49768 467 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 CACNA2D1P54289 1103 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 DYNLT1P63172 113 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 ROR1Q01973 937 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 UBE3AQ05086 875 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 MMRN1Q13201 1228 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 MTA1Q13330 715 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 MORF4L2Q15014 288 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 ZC3H12AQ5D1E8 599 aaKnown RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 BRMS1LQ5PSV4 323 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 SPOUT1Q5T280 376 aaKnown RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 SYPL2Q5VXT5 272 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 BTBD8Q5XKL5 378 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms