RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 OVCH2Q7RTZ1 564 aa3.44□□□□□ -1.86
VAPA-208ENST00000584796 C16orf71Q8IYS4 520 aaPredicted RBP3.44□□□□□ -1.86
VAPA-208ENST00000584796 METTL25Q8N6Q8 603 aa3.44□□□□□ -1.86
VAPA-208ENST00000584796 RBMXL3Q8N7X1 1067 aaKnown RBP3.44□□□□□ -1.86
VAPA-208ENST00000584796 ZBTB34Q8NCN2 500 aa3.44□□□□□ -1.86
VAPA-208ENST00000584796 NGDNQ8NEJ9 315 aaKnown RBP3.44□□□□□ -1.86
VAPA-208ENST00000584796 JPH3Q8WXH2 748 aaPredicted RBP3.44□□□□□ -1.86
VAPA-208ENST00000584796 NMD3Q96D46 503 aaKnown RBP3.44□□□□□ -1.86
VAPA-208ENST00000584796 C22orf23Q9BZE7 217 aa3.44□□□□□ -1.86
VAPA-208ENST00000584796 HIPK2Q9H2X6 1198 aa3.44□□□□□ -1.86
VAPA-208ENST00000584796 SEMA4BQ9NPR2 832 aaPredicted RBP3.44□□□□□ -1.86
VAPA-208ENST00000584796 TYW1Q9NV66 732 aaKnown RBP3.44□□□□□ -1.86
VAPA-208ENST00000584796 NKX1-2Q9UD57 310 aaPredicted RBP3.44□□□□□ -1.86
VAPA-208ENST00000584796 PTPN23Q9H3S7 1636 aa3.44□□□□□ -1.86
VAPA-208ENST00000584796 USP19O94966 1318 aa3.44□□□□□ -1.86
VAPA-208ENST00000584796 MYOM2P54296 1465 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 FYB1O15117 783 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 INPPL1O15357 1258 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 FRS3O43559 492 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 PIAS2O75928 621 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 IDI1Q13907 227 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 TTF1Q15361 905 aaPredicted RBP3.43□□□□□ -1.86
VAPA-208ENST00000584796 ST3GAL2Q16842 350 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 ZNF549Q6P9A3 640 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 USP49Q70CQ1 688 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 TPH2Q8IWU9 490 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 KIAA0319LQ8IZA0 1049 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 KRT78Q8N1N4 520 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 ZNF668Q96K58 619 aaPredicted RBP3.43□□□□□ -1.86
VAPA-208ENST00000584796 LRGUKQ96M69 825 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 TMEM60Q9H2L4 133 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 FAM83DQ9H4H8 585 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 TMEM8AQ9HCN3 771 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 CPNE7Q9UBL6 633 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 ZNF180Q9UJW8 692 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 CRYBG1Q9Y4K1 1723 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 NOS1P29475 1434 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 EEA1Q15075 1411 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 ARHGAP31Q2M1Z3 1444 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 CASZ1Q86V15 1759 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 SPATA31A1Q5TZJ5 1347 aa3.43□□□□□ -1.86
VAPA-208ENST00000584796 RALGAPBQ86X10 1494 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 USP32Q8NFA0 1604 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 CAPN8A6NHC0 703 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 C2CD4BA6NLJ0 364 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 ISM1B1AKI9 464 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 FOXN3O00409 490 aaPredicted RBP3.42□□□□□ -1.86
VAPA-208ENST00000584796 RRHO14718 337 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 AKAP10O43572 662 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 MARCH6O60337 910 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 PRAMEF2O60811 474 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 RFPL1O75677 317 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 PLAUP00749 431 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 ACVR2AP27037 513 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 CPA2P48052 419 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 CPT1AP50416 773 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 ITGA8P53708 1063 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 SUMO3P55854 103 aaPredicted RBP3.42□□□□□ -1.86
VAPA-208ENST00000584796 KPNB1Q14974 876 aaKnown RBP3.42□□□□□ -1.86
VAPA-208ENST00000584796 CLCA4Q14CN2 919 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 PTPROQ16827 1216 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 PFKFB3Q16875 520 aaPredicted RBP3.42□□□□□ -1.86
VAPA-208ENST00000584796 FAM110CQ1W6H9 321 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 EARS2Q5JPH6 523 aaKnown RBP3.42□□□□□ -1.86
VAPA-208ENST00000584796 APOA5Q6Q788 366 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 ZNF793Q6ZN11 406 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 BCAS4Q8TDM0 211 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 THOC3Q96J01 351 aaKnown RBP3.42□□□□□ -1.86
VAPA-208ENST00000584796 CTAGE1Q96RT6 745 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 TM2D2Q9BX73 214 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 MLXIPQ9HAP2 919 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 DKK4Q9UBT3 224 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 AFF4Q9UHB7 1163 aaKnown RBP3.42□□□□□ -1.86
VAPA-208ENST00000584796 STEAP1Q9UHE8 339 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 VPS51Q9UID3 782 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 LMTK2Q8IWU2 1503 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 DUOX2Q9NRD8 1548 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 CEP162Q5TB80 1403 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 RIMS2Q9UQ26 1411 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 SBF2Q86WG5 1849 aa3.42□□□□□ -1.86
VAPA-208ENST00000584796 NWD2Q9ULI1 1742 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 PXDNQ92626 1479 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 MTUS2Q5JR59 1369 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 PLEKHG1Q9ULL1 1385 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 THSD7AQ9UPZ6 1657 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 AQP7P3A6NL99 342 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 FAM227AF5H4B4 570 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 TLX3O43711 291 aaPredicted RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 RASSF9O75901 435 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 MBPP02686 304 aaPredicted RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 CD63P08962 238 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 MYBP10242 640 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 TXNP10599 105 aaKnown RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 IL1R1P14778 569 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 COPAP53621 1224 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 TXNL4AP83876 142 aaKnown RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 SLC29A2Q14542 456 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms