RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TAC4Q86UU9 113 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 HMGB4Q8WW32 186 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 NAA15Q9BXJ9 866 aaKnown RBP21.25■□□□□ 0.99
SS18-224ENST00000584083 TMEM63CQ9P1W3 806 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 CLEC4EQ9ULY5 219 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 TLR6Q9Y2C9 796 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 ABCA7Q8IZY2 2146 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 SPTBN4Q9H254 2564 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 ZBTB24O43167 697 aaPredicted RBP21.24■□□□□ 0.99
SS18-224ENST00000584083 ACSL4O60488 711 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 COPB1P53618 953 aaKnown RBP21.24■□□□□ 0.99
SS18-224ENST00000584083 TYRO3Q06418 890 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 NNTQ13423 1086 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 TAF5Q15542 800 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 ELF2Q15723 593 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 EFHC1Q5JVL4 640 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 OR6B2Q6IFH4 312 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 RFWD3Q6PCD5 774 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 ANKS1BQ7Z6G8 1248 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 IPO4Q8TEX9 1081 aaKnown RBP21.24■□□□□ 0.99
SS18-224ENST00000584083 UCMAQ8WVF2 138 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 ZC3H10Q96K80 434 aaKnown RBP21.24■□□□□ 0.99
SS18-224ENST00000584083 FCRL2Q96LA5 508 aaPredicted RBP21.24■□□□□ 0.99
SS18-224ENST00000584083 DDX50Q9BQ39 737 aaKnown RBP21.24■□□□□ 0.99
SS18-224ENST00000584083 STK33Q9BYT3 514 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 PARD6AQ9NPB6 346 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 CACNA2D2Q9NY47 1150 aa21.24■□□□□ 0.99
SS18-224ENST00000584083 GOLGA6L7A0A1B0GV03 622 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 LRP3O75074 770 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 RHOBTB1O94844 696 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 CYP11B1P15538 503 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 HOXD9P28356 352 aaPredicted RBP21.23■□□□□ 0.99
SS18-224ENST00000584083 KLK7P49862 253 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 PLK5Q496M5 336 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 DCAF6Q58WW2 860 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 TAF3Q5VWG9 929 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 TMEM35BQ8NCS4 154 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 AZIN2Q96A70 460 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 ERLEC1Q96DZ1 483 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 PIWIL1Q96J94 861 aaKnown RBP21.23■□□□□ 0.99
SS18-224ENST00000584083 LOXL4Q96JB6 756 aa21.23■□□□□ 0.99
SS18-224ENST00000584083 PCMTD1Q96MG8 357 aaPredicted RBP21.23■□□□□ 0.99
SS18-224ENST00000584083 NAT10Q9H0A0 1025 aaKnown RBP21.23■□□□□ 0.99
SS18-224ENST00000584083 FAM207AQ9NSI2 230 aaPredicted RBP21.23■□□□□ 0.99
SS18-224ENST00000584083 F8VZ95 297 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 GFRA2O00451 464 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 TBL1XO60907 577 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 GRAP2O75791 330 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 TRUB2O95900 331 aaKnown RBP21.22■□□□□ 0.99
SS18-224ENST00000584083 MOCS2O96007 188 aaPredicted RBP21.22■□□□□ 0.99
SS18-224ENST00000584083 APOEP02649 317 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 ERBB2P04626 1255 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 GLI1P08151 1106 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 TGM1P22735 817 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 SLC6A4P31645 630 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 POLR2FP61218 127 aaKnown RBP21.22■□□□□ 0.99
SS18-224ENST00000584083 CDK17Q00537 523 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 FAM133BQ5BKY9 247 aaKnown RBP21.22■□□□□ 0.99
SS18-224ENST00000584083 PIK3R6Q5UE93 754 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 CAVIN1Q6NZI2 390 aaKnown RBP21.22■□□□□ 0.99
SS18-224ENST00000584083 FAM183BPQ6ZVS7 135 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 C11orf74Q86VG3 221 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 AOPEPQ8N6M6 819 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 RLN3Q8WXF3 142 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 SLC39A13Q96H72 371 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 CIPCQ9C0C6 399 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 DUSP15Q9H1R2 295 aaPredicted RBP21.22■□□□□ 0.99
SS18-224ENST00000584083 GANQ9H2C0 597 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 ARRDC1-AS1Q9H2J1 176 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 FAM204AQ9H8W3 233 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 SEMA4GQ9NTN9 838 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 STIM2Q9P246 746 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 LIMA1Q9UHB6 759 aaKnown RBP21.22■□□□□ 0.99
SS18-224ENST00000584083 STON1Q9Y6Q2 735 aa21.22■□□□□ 0.99
SS18-224ENST00000584083 A0A1W2PQF6 199 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 WASH3PC4AMC7 463 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 IRAK2O43187 625 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 HSF2BPO75031 334 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 ID4P47928 161 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 SGSHP51688 502 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 LMNB2Q03252 620 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 ARID5AQ03989 594 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 E2F5Q15329 346 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 PTPN20Q4JDL3 420 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 ZC3H12AQ5D1E8 599 aaKnown RBP21.21■□□□□ 0.99
SS18-224ENST00000584083 NADSYN1Q6IA69 706 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 DEFB106AQ8N104 65 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 OLIG1Q8TAK6 271 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 SPACA7Q96KW9 195 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 GABRG3Q99928 467 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 IRX2Q9BZI1 471 aaPredicted RBP21.21■□□□□ 0.99
SS18-224ENST00000584083 NLRC4Q9NPP4 1024 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 ASNSD1Q9NWL6 643 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 ELOVL2Q9NXB9 296 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 RAD54BQ9Y620 910 aa21.21■□□□□ 0.99
SS18-224ENST00000584083 SYNJ2BP-COX16A0A087WUM0 186 aa21.2■□□□□ 0.98
SS18-224ENST00000584083 FAM170AA1A519 330 aa21.2■□□□□ 0.98
SS18-224ENST00000584083 TYW5A2RUC4 315 aaKnown RBP21.2■□□□□ 0.98
SS18-224ENST00000584083 LGALS16A8MUM7 142 aa21.2■□□□□ 0.98
SS18-224ENST00000584083 NPC1O15118 1278 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms