RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 APOEP02649 317 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 WEE1P30291 646 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 HARS2P49590 506 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ZNF211Q13398 564 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 NNTQ13423 1086 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 TCEAL1Q15170 157 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 OTUD1Q5VV17 481 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 C11orf63Q6NUN7 778 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 MTSS1LQ765P7 747 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 NT5DC3Q86UY8 548 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 DDX42Q86XP3 938 aaKnown RBP eCLIP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 FGF14Q92915 247 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 WBP2Q969T9 261 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 PLD4Q96BZ4 506 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 RSPRY1Q96DX4 576 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 KXD1Q9BQD3 176 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ZWILCHQ9H900 591 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 KIF9Q9HAQ2 790 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 TRPV4Q9HBA0 871 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 LIMD1Q9UGP4 676 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 PCSK1NQ9UHG2 260 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 SLC12A6Q9UHW9 1150 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 LSM7Q9UK45 103 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 AMFRQ9UKV5 643 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 OBSL1O75147 1896 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 EYSQ5T1H1 3165 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 XIRP2A4UGR9 3374 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 ZNF185O15231 689 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 ENDOD1O94919 500 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 SLC2A3P11169 496 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 FCARP24071 287 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 CORO1AP31146 461 aaKnown RBP11.37□□□□□ -0.59
TOP3A-216ENST00000583804 CCR1P32246 355 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 CXCR3P49682 368 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 HDAC4P56524 1084 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 RING1Q06587 406 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 SMTNL2Q2TAL5 461 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 NUGGCQ68CJ6 796 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 TXNRD3NBQ6F5E7 133 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 AADACL2Q6P093 401 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 CC2D1AQ6P1N0 951 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-216ENST00000583804 DENND1CQ8IV53 801 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 UNC45BQ8IWX7 931 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 YAF2Q8IY57 180 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 SYCE1Q8N0S2 351 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 KIF18AQ8NI77 898 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 RIN3Q8TB24 985 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 BPIFB1Q8TDL5 484 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 ADAMTS19Q8TE59 1207 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 CENPIQ92674 756 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-216ENST00000583804 E2F7Q96AV8 911 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 ELSPBP1Q96BH3 223 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 PGAP3Q96FM1 320 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-216ENST00000583804 SLC39A13Q96H72 371 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 FCRL2Q96LA5 508 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-216ENST00000583804 LRRC3BQ96PB8 259 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 RPP25Q9BUL9 199 aaKnown RBP11.37□□□□□ -0.59
TOP3A-216ENST00000583804 TLR10Q9BXR5 811 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 DCLK3Q9C098 648 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 GPATCH2LQ9NWQ4 482 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 LCMT1Q9UIC8 334 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 NUMBLQ9Y6R0 609 aa11.37□□□□□ -0.59
TOP3A-216ENST00000583804 DENND4CQ5VZ89 1909 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 KCNK3O14649 394 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 PRPSAP2O60256 369 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 LRCH4O75427 683 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 IGLV3-27P01718 113 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 KLKB1P03952 638 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 MIPP30301 263 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 HADHBP55084 474 aaKnown RBP11.36□□□□□ -0.59
TOP3A-216ENST00000583804 EIF4EBP2Q13542 120 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-216ENST00000583804 HTR4Q13639 388 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 GRM2Q14416 872 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 PPP2R5DQ14738 602 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 ACAP1Q15027 740 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 RPS6KA1Q15418 735 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 ZNF77Q15935 545 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 ARL13BQ3SXY8 428 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 GLIPR1L2Q4G1C9 344 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 BRMS1LQ5PSV4 323 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 MEI1Q5TIA1 1274 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 VITQ6UXI7 678 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 BNIPLQ7Z465 357 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 SLFN11Q7Z7L1 901 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 MFSD6LQ8IWD5 586 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 ZDHHC14Q8IZN3 488 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 ARFGAP1Q8N6T3 406 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 NIPA2Q8N8Q9 360 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 ATP6V0D2Q8N8Y2 350 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 RSAD2Q8WXG1 361 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 CALR3Q96L12 384 aaKnown RBP11.36□□□□□ -0.59
TOP3A-216ENST00000583804 ASB2Q96Q27 587 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 NCAPGQ9BPX3 1015 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 PLA2G2FQ9BZM2 168 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 TKTL2Q9H0I9 626 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 TMEM51Q9NW97 253 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 THG1LQ9NWX6 298 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms