RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 LINC00271P0C7V0 271 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 KCNA5P22460 613 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 L1CAMP32004 1257 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 LMAN1P49257 510 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 ZNF135P52742 658 aaPredicted RBP9.62□□□□□ -0.87
SS18-220ENST00000582092 YWHAGP61981 247 aaKnown RBP eCLIP9.62□□□□□ -0.87
SS18-220ENST00000582092 RPL10AP62906 217 aaKnown RBP9.62□□□□□ -0.87
SS18-220ENST00000582092 ADCY1Q08828 1119 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 MORF4L2Q15014 288 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 TAF12Q16514 161 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 DPYSL2Q16555 572 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 TAZQ16635 292 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 TUBB8Q3ZCM7 444 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 TCEAL5Q5H9L2 206 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 RAB41Q5JT25 222 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
SS18-220ENST00000582092 C6orf118Q5T5N4 469 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 BSPRYQ5W0U4 402 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 TRNP1Q6NT89 227 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 FUT10Q6P4F1 479 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 ANKS3Q6ZW76 656 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 CENPUQ71F23 418 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 PPIL6Q8IXY8 311 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 IQCKQ8N0W5 287 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 NUP93Q8N1F7 819 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 SCML4Q8N228 414 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 ARFGAP2Q8N6H7 521 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 SLC35B2Q8TB61 432 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 KHSRPQ92945 711 aaKnown RBP eCLIP9.62□□□□□ -0.87
SS18-220ENST00000582092 FUBP3Q96I24 572 aaKnown RBP eCLIP9.62□□□□□ -0.87
SS18-220ENST00000582092 TTC25Q96NG3 672 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 SLC2A13Q96QE2 648 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 NPY6RQ99463 290 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 CDCA3Q99618 268 aaPredicted RBP9.62□□□□□ -0.87
SS18-220ENST00000582092 EPAS1Q99814 870 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 HERPUD2Q9BSE4 406 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 ZCWPW1Q9H0M4 648 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 CWH43Q9H720 699 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 ENTPD7Q9NQZ7 604 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 CLDND1Q9NY35 253 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 PAK5Q9P286 719 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 SAE1Q9UBE0 346 aaPredicted RBP9.62□□□□□ -0.87
SS18-220ENST00000582092 DNAJB4Q9UDY4 337 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 SLC12A6Q9UHW9 1150 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 FZD10Q9ULW2 581 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 CHD9Q3L8U1 2897 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 E7EVH7 732 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 H3BQF6 201 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 KCNN4O15554 427 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 RTN3O95197 1032 aaPredicted RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 SYF2O95926 243 aaKnown RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 OR4Q2P0C623 313 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 KLRC2P26717 231 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 ATP5DP30049 168 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 ECHS1P30084 290 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 ADRA1BP35368 520 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 SLC11A1P49279 550 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 ARL4CP56559 192 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 TPI1P60174 286 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 BASP1P80723 227 aaKnown RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 SARNPP82979 210 aaKnown RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 TFF2Q03403 129 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 ADCY2Q08462 1091 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 XRCC4Q13426 336 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 NOMO1Q15155 1222 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 OASLQ15646 514 aaKnown RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 CCDC142Q17RM4 750 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 LEXMQ3ZCV2 418 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 HEATR6Q6AI08 1181 aaKnown RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 PM20D1Q6GTS8 502 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 ZDHHC24Q6UX98 284 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 CD300LGQ6UXG3 332 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 NPNTQ6UXI9 565 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 TMC7Q7Z402 723 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 ANKS1BQ7Z6G8 1248 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 LRRTM3Q86VH5 581 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 CCDC185Q8N715 623 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 PLD5Q8N7P1 536 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 FAM71DQ8N9W8 422 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 OR10T2Q8NGX3 314 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 ADAMTS19Q8TE59 1207 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 C2orf15Q8WU43 125 aaKnown RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 EDEM1Q92611 657 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 FAF2Q96CS3 445 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 C8orf48Q96LL4 319 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 TMEM209Q96SK2 561 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 UHRF1Q96T88 793 aaPredicted RBP9.61□□□□□ -0.87
SS18-220ENST00000582092 RTP3Q9BQQ7 232 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 TTPALQ9BTX7 342 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 RHOBTB2Q9BYZ6 727 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 IGFLR1Q9H665 355 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 TLE6Q9H808 572 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 TMLHEQ9NVH6 421 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 FBXW11Q9UKB1 542 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 NEU2Q9Y3R4 380 aa9.61□□□□□ -0.87
SS18-220ENST00000582092 CHD7Q9P2D1 2997 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 TRANK1O15050 2925 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SMIM23A6NLE4 172 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms