RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GREM1O60565 184 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 NFATC1O95644 943 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 APOEP02649 317 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 GPD1P21695 349 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 RFC1P35251 1148 aaPredicted RBP16.12■□□□□ 0.17
SS18-216ENST00000580751 PITX1P78337 314 aaPredicted RBP16.12■□□□□ 0.17
SS18-216ENST00000580751 ZXDAP98168 799 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 NME3Q13232 169 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 MTA1Q13330 715 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 EML3Q32P44 896 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 Q6ZNB5 142 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 SND1Q7KZF4 910 aaKnown RBP eCLIP16.12■□□□□ 0.17
SS18-216ENST00000580751 DNAAF5Q86Y56 855 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 BBS7Q8IWZ6 715 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 CPA6Q8N4T0 437 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 ASIC4Q96FT7 647 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 SLC39A13Q96H72 371 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 FCRL2Q96LA5 508 aaPredicted RBP16.12■□□□□ 0.17
SS18-216ENST00000580751 CFAP57Q96MR6 1250 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 DUSP10Q9Y6W6 482 aa16.12■□□□□ 0.17
SS18-216ENST00000580751 SYNJ2BP-COX16A0A087WUM0 186 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 MACROD2A1Z1Q3 448 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 SCAMP3O14828 347 aaKnown RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 GJB6O95452 261 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 KLKB1P03952 638 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 CCR1P32246 355 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 RDXP35241 583 aaKnown RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 NOP2P46087 812 aaKnown RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 SLC11A2P49281 568 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 ZNF143P52747 638 aaPredicted RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 GNG11P61952 73 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 RPL7AP62424 266 aaKnown RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 DEUP1Q05D60 604 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 EIF4EBP2Q13542 120 aaPredicted RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 RUNX3Q13761 415 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 PPP2R5DQ14738 602 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 ITPRIPL2Q3MIP1 535 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 OTUD1Q5VV17 481 aaPredicted RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 TRIM68Q6AZZ1 485 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 TRNP1Q6NT89 227 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 C11orf63Q6NUN7 778 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 STRADAQ7RTN6 431 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 DENND1CQ8IV53 801 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 FNIP1Q8TF40 1166 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 RNF34Q969K3 372 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 WBP2Q969T9 261 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 AZIN2Q96A70 460 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 MSANTD3Q96H12 275 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 TBCBQ99426 244 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 COL25A1Q9BXS0 654 aaPredicted RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 EBF3Q9H4W6 596 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.11■□□□□ 0.17
SS18-216ENST00000580751 COX16Q9P0S2 106 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 CTTNBP2NLQ9P2B4 639 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 WNT16Q9UBV4 365 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 FBXL21Q9UKT6 434 aa16.11■□□□□ 0.17
SS18-216ENST00000580751 AGO1Q9UL18 857 aaKnown RBP16.11■□□□□ 0.17
SS18-216ENST00000580751 A0A0U1RQJ8 604 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 TNFRSF10AO00220 468 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 ADH1CP00326 375 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 TNNT1P13805 278 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 ARSAP15289 507 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 CHKAP35790 457 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 MLLT6P55198 1093 aaPredicted RBP16.1■□□□□ 0.17
SS18-216ENST00000580751 NAP1L1P55209 391 aaKnown RBP16.1■□□□□ 0.17
SS18-216ENST00000580751 TNK2Q07912 1038 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 NR1H3Q13133 447 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 TUBB2AQ13885 445 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 ACAP1Q15027 740 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 CCDC14Q49A88 953 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 ZC3H12AQ5D1E8 599 aaKnown RBP16.1■□□□□ 0.17
SS18-216ENST00000580751 ZNF569Q5MCW4 686 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 BRMS1LQ5PSV4 323 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 BNIPLQ7Z465 357 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 SLFN11Q7Z7L1 901 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 TPCN2Q8NHX9 752 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 ZNF564Q8TBZ8 553 aaPredicted RBP16.1■□□□□ 0.17
SS18-216ENST00000580751 ATRIPQ8WXE1 791 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 EDAQ92838 391 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 ARHGEF26Q96DR7 871 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 C16orf45Q96MC5 204 aaPredicted RBP16.1■□□□□ 0.17
SS18-216ENST00000580751 NCAPGQ9BPX3 1015 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 DDX50Q9BQ39 737 aaKnown RBP16.1■□□□□ 0.17
SS18-216ENST00000580751 CNPY3Q9BT09 278 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 TUBB2BQ9BVA1 445 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 NUP85Q9BW27 656 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 LINC00597Q9H2U6 94 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 ECT2Q9H8V3 914 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 HPS4Q9NQG7 708 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 PIGVQ9NUD9 493 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 GTSE1Q9NYZ3 720 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 TRIM10Q9UDY6 481 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 SLC12A6Q9UHW9 1150 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 SALL4Q9UJQ4 1053 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 STOML2Q9UJZ1 356 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 JRKLQ9Y4A0 524 aa16.1■□□□□ 0.17
SS18-216ENST00000580751 TICRRQ7Z2Z1 1910 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 COL4A2P08572 1712 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 F5P12259 2224 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms