RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 A0A1W2PR77 199 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 C10orf142B7Z368 130 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 SYNCRIPO60506 623 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 JAK2O60674 1132 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 PDGFRBP09619 1106 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 YWHAQP27348 245 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 LSSP48449 732 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 TUBP50607 506 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 CDH8P55286 799 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 C21orf59P57076 290 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 RACK1P63244 317 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 TFAMQ00059 246 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 GTF2BQ00403 316 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 GUCY1B3Q02153 619 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 MDH1BQ5I0G3 518 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 HYIQ5T013 277 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 KRT79Q5XKE5 535 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 TMEM215Q68D42 235 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 LSMEM2Q8N112 164 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 NUP93Q8N1F7 819 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 CSGALNACT2Q8N6G5 542 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 PDZD8Q8NEN9 1154 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 OR2T3Q8NH03 318 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 SCAMP5Q8TAC9 235 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 OVCA2Q8WZ82 227 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 FBXO32Q969P5 355 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 PIWIL1Q96J94 861 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 REEP2Q9BRK0 252 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 ACE2Q9BYF1 805 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 ZNF518BQ9C0D4 1074 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 LHX5Q9H2C1 402 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 POLR1BQ9H9Y6 1135 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 IL37Q9NZH6 218 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 CLEC4EQ9ULY5 219 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 SRPK3Q9UPE1 567 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 MAN2B2Q9Y2E5 1009 aa8.11□□□□□ -1.11
SMARCE1-217ENST00000580654 A0A1W2PPC4 97 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 FAM92AA1XBS5 289 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 CLDN5O00501 218 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 NPC1O15118 1278 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 USP12O75317 370 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 IL18RAPO95256 599 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 TBX18O95935 607 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 PENKP01210 267 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 EPHX1P07099 455 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 PLA2G4BP0C869 781 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 WARSP23381 471 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 ZNF131P52739 623 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 BCAT1P54687 386 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 RPS14P62263 151 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 TLE1Q04724 770 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 GRIN1Q05586 938 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 CAMK2GQ13555 558 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 MAPRE1Q15691 268 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 ARL13BQ3SXY8 428 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 FYB2Q5VWT5 728 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 KIAA0895LQ68EN5 471 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 CCDC81Q6ZN84 652 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 DPH6Q7L8W6 267 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 PRR11Q96HE9 360 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 KCNK16Q96T55 309 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 PLIN2Q99541 437 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 MRPL45Q9BRJ2 306 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 B3GNT5Q9BYG0 378 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 BTBD1Q9H0C5 482 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 DPEP3Q9H4B8 488 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 KCND2Q9NZV8 630 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 PAXBP1Q9Y5B6 917 aa8.1□□□□□ -1.11
SMARCE1-217ENST00000580654 CENPEQ02224 2701 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 PMS2P1A4D2B8 440 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 TRIM38O00635 465 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 YKT6O15498 198 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 CSO75390 466 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 RTN3O95197 1032 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 CD2BP2O95400 341 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 KRT19P08727 400 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 RXRGP48443 463 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 TOB1P50616 345 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 NXPH1P58417 271 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 RBP5P82980 135 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 E2F1Q01094 437 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 CLN3Q13286 438 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 KCNJ12Q14500 433 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 ZRSR1Q15695 479 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 ME3Q16798 604 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 SLFN12LQ6IEE8 588 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 IGF2-ASQ6U949 168 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 HS2ST1Q7LGA3 356 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 SPATS2Q86XZ4 545 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 BRSK2Q8IWQ3 736 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 MYCT1Q8N699 235 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 ZNF366Q8N895 744 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 MMS19Q96T76 1030 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 MTMR12Q9C0I1 747 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 TMEM245Q9H330 911 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 THSD1Q9NS62 852 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 OSER1Q9NX31 292 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 ELOVL2Q9NXB9 296 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 ITGA11Q9UKX5 1188 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms