RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 MRGPRX1Q96LB2 322 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 FAM81BQ96LP2 452 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 KREMEN1Q96MU8 473 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 NUSAP1Q9BXS6 441 aaKnown RBP12.04□□□□□ -0.48
SSH2-208ENST00000579040 ELOVL2Q9NXB9 296 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 SFMBT1Q9UHJ3 866 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 RWDD2AQ9UIY3 292 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 PILRBQ9UKJ0 227 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 PCDH15Q96QU1 1955 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 DNAH14Q0VDD8 3507 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 C4orf47A7E2U8 309 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 MSI1O43347 362 aaKnown RBP12.03□□□□□ -0.48
SSH2-208ENST00000579040 HOXD9P28356 352 aaPredicted RBP12.03□□□□□ -0.48
SSH2-208ENST00000579040 ACADSBP45954 432 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 RPL34P49207 117 aaKnown RBP12.03□□□□□ -0.48
SSH2-208ENST00000579040 IRX4P78413 519 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 NNTQ13423 1086 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 TRIM61Q5EBN2 209 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 MPP7Q5T2T1 576 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 SLC23A3Q6PIS1 610 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 ARMCX6Q7L4S7 300 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 ZNF557Q8N988 423 aaPredicted RBP12.03□□□□□ -0.48
SSH2-208ENST00000579040 WFIKKN2Q8TEU8 576 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 STK32AQ8WU08 396 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 AZIN2Q96A70 460 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 TRIM62Q9BVG3 475 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 RAD54BQ9Y620 910 aa12.03□□□□□ -0.48
SSH2-208ENST00000579040 LAMA1P25391 3075 aa12.02□□□□□ -0.48
SSH2-208ENST00000579040 EPG5Q9HCE0 2579 aa12.02□□□□□ -0.48
SSH2-208ENST00000579040 CHD8Q9HCK8 2581 aa12.02□□□□□ -0.48
SSH2-208ENST00000579040 WASH3PC4AMC7 463 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 CDX4O14627 284 aaPredicted RBP12.02□□□□□ -0.49
SSH2-208ENST00000579040 IRAK2O43187 625 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 MED7O43513 233 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 SYNCRIPO60506 623 aaKnown RBP12.02□□□□□ -0.49
SSH2-208ENST00000579040 KCNK5O95279 499 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 KRT5P13647 590 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 KCNA4P22459 653 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 ITPKAP23677 461 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 IL12RB1P42701 662 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 GPD2P43304 727 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 SLC11A2P49281 568 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 ZNF33AQ06730 810 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 ZNF234Q14588 700 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 DUOXA1Q1HG43 343 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 FUT11Q495W5 492 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 TRIM65Q6PJ69 517 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 KIAA1324Q6UXG2 1013 aaKnown RBP12.02□□□□□ -0.49
SSH2-208ENST00000579040 BEND5Q7L4P6 421 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.02□□□□□ -0.49
SSH2-208ENST00000579040 FOXJ1Q92949 421 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 TMA16Q96EY4 203 aaKnown RBP12.02□□□□□ -0.49
SSH2-208ENST00000579040 DDX50Q9BQ39 737 aaKnown RBP12.02□□□□□ -0.49
SSH2-208ENST00000579040 CIPCQ9C0C6 399 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 PRDM16Q9HAZ2 1276 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 UBE2TQ9NPD8 197 aaPredicted RBP12.02□□□□□ -0.49
SSH2-208ENST00000579040 TMEM74BQ9NUR3 256 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 CHMP5Q9NZZ3 219 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 USP36Q9P275 1121 aaKnown RBP12.02□□□□□ -0.49
SSH2-208ENST00000579040 CLEC4EQ9ULY5 219 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 CYP8B1Q9UNU6 501 aa12.02□□□□□ -0.49
SSH2-208ENST00000579040 MAP1BP46821 2468 aaKnown RBP12.01□□□□□ -0.49
SSH2-208ENST00000579040 GTPBP10A4D1E9 387 aaKnown RBP12.01□□□□□ -0.49
SSH2-208ENST00000579040 TSPAN3O60637 253 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 NDUFS2O75306 463 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 CALCAP01258 141 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 CFIP05156 583 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 SERPINF2P08697 491 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 NCAM1P13591 858 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 CSRP1P21291 193 aaKnown RBP12.01□□□□□ -0.49
SSH2-208ENST00000579040 HLA-FP30511 346 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 TBX4P57082 545 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 ARID5AQ03989 594 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 N4BP2L1Q5TBK1 243 aaPredicted RBP12.01□□□□□ -0.49
SSH2-208ENST00000579040 PIK3R6Q5UE93 754 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 TMEM215Q68D42 235 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 SERPINA13PQ6UXR4 307 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 GBP6Q6ZN66 633 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 KIAA0907Q7Z7F0 614 aaPredicted RBP12.01□□□□□ -0.49
SSH2-208ENST00000579040 MLKLQ8NB16 471 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 CLEC4CQ8WTT0 213 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 ZNF419Q96HQ0 510 aaPredicted RBP12.01□□□□□ -0.49
SSH2-208ENST00000579040 HSPA12BQ96MM6 686 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 SERPINB11Q96P15 392 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 SLC4A5Q9BY07 1137 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 MKRN2Q9H000 416 aaKnown RBP12.01□□□□□ -0.49
SSH2-208ENST00000579040 FBRSQ9HAH7 460 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 SUSD2Q9UGT4 822 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 SLC6A14Q9UN76 642 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 TLR6Q9Y2C9 796 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 NUMA1Q14980 2115 aa12.01□□□□□ -0.49
SSH2-208ENST00000579040 NYNRINQ9P2P1 1898 aaKnown RBP12□□□□□ -0.49
SSH2-208ENST00000579040 TYW5A2RUC4 315 aaKnown RBP12□□□□□ -0.49
SSH2-208ENST00000579040 PIK3R2O00459 728 aa12□□□□□ -0.49
SSH2-208ENST00000579040 ACSL4O60488 711 aa12□□□□□ -0.49
SSH2-208ENST00000579040 LETM1O95202 739 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms